<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19617
Description |
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase |
Sequence | MAFEMSLPHAPRIRVVAPDGGETHAEDEAQWALYYSVQRALQEQDGQAPAEGEGGEEGGKAAAAKAPQPSDPQKVLSKLLTARGELDVITDLVTFVEQQQFLAVEGIHRPPPTLEERTRARALRLAAARQQLHGAAGLLGRGLAALQAQAAVDDRFLADLSQLRRRWKLRRHAGAGPGAAGLFYADISLPLRGALARAVSQEGVQCNIIQDTNGDACIVEAAAPGGKRQAVRGWRHIHAVLEAKQALLAWRVMGQLLAAAARLPQHEADPDGAVAALQRLAAAAAADAQAAVHRAVASAPQAAGAAAASMDVDANGEQQQSEAAAALAAPASLPAGMLSSAAQDLQAALSSPGFQQQFEARALLLLSHLLTGGSSSGASAVTAADAETAQQALLAGLLRWLRHAAACQRPLATMTEFTKVIPASCLRGSGLLLTPEFRDAVVPETGTYTLQNAEGKQTTCTITRKAQGAHERCDIHGGWRQFARDNEIKEGDEVRIRHLGGRVIEITKTGRTGTPGRTPAKAAKTPGRSRASGSGSKTPRTAEGGVAKRRSSSSAKKAKPAAAAGTPASPASGRRGRRSSQGAASAARAARAAPAEDDWQGQQEQAAGSSGWCSLAGWAVALYRVGGHVIATRSLEGAYTVAGDVVGCFQLASALEILHAALGLVGGSPLTALMQWAGRSNVLFGVVAAVPEVQNRPAVGAMFLAWALSEIIRYPWYAASLAGACPHWLTWLRYTAFIGLYPVGVLGEMKSVFDALPFIKARGLRSLALPNAANWGFDYHTFLVVLLCLYPFLWFRLYAFLFRQRRKKLGAPAAVAGSKKRE |
Length | 822 |
Position | Head |
Organism | Chlorella sorokiniana (Freshwater green alga) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Chlorophyta> core chlorophytes> Trebouxiophyceae>
Chlorellales> Chlorellaceae> Chlorella clade> Chlorella.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.088 |
Instability index | 51.50 |
Isoelectric point | 9.69 |
Molecular weight | 86461.39 |
Publications | PubMed=29178410
|
Function
Annotated function |
Catalyzes the third of the four reactions of the long-chain
fatty acids elongation cycle. This endoplasmic reticulum-bound
enzymatic process, allows the addition of two carbons to the chain of
long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme
catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into
trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation.
Thereby, it participates to the production of VLCFAs of different chain
lengths that are involved in multiple biological processes as
precursors of membrane lipids and lipid mediators.
ECO:0000256 RuleBase:RU363109
|
GO - Cellular Component | endoplasmic reticulum membrane GO:0005789 IEA:UniProtKB-SubCell
integral component of membrane GO:0016021 IEA:UniProtKB-KW
|
GO - Biological Function | 3-hydroxy-arachidoyl-CoA dehydratase activity GO:0102343 IEA:UniProtKB-EC
3-hydroxy-behenoyl-CoA dehydratase activity GO:0102344 IEA:UniProtKB-EC
3-hydroxy-lignoceroyl-CoA dehydratase activity GO:0102345 IEA:UniProtKB-EC
DNA binding GO:0003677 IEA:UniProtKB-KW
very-long-chain 3-hydroxyacyl-CoA dehydratase activity GO:0102158 IEA:UniProtKB-EC
|
GO - Biological Process | fatty acid biosynthetic process GO:0006633 IEA:UniProtKB-UniPathway
|
Interaction
Repeat regions
Repeats |
>MDP19617
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.32| 17| 21| 268| 287| 1
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283- 304 (14.43/ 6.37) AAAADaqAAVHRavaSAPQAAG
592- 608 (29.89/ 9.27) AAPAE..DDWQG...QQEQAAG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.13| 15| 15| 229| 243| 2
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229- 243 (27.87/13.92) QAVRGWRHIHAVLEA
245- 259 (26.26/12.74) QALLAWRVMGQLLAA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.63| 14| 15| 321| 334| 3
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321- 334 (23.71/11.46) SEAAAALAAPASLP
339- 352 (22.92/10.80) SSAAQDLQAALSSP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.32| 13| 15| 623| 635| 4
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623- 635 (23.39/16.46) YRVGGHVIATRSL
639- 651 (23.93/17.04) YTVAGDVVGCFQL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 259.46| 70| 230| 120| 193| 5
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120- 190 (118.15/44.64) ARALRLAAARQQLHGAAGL.LGRGLAAL....................QAQAAVDDRFLA.D.LSQ.LRRRWKLRRHAGA..GPGAAGLFYADIsLP
360- 422 (89.47/29.77) ARALLLLS..HLLTGGSSS.GASAVTAA....................DAETA.QQALLA.GlL......RW.L.RHAAAcqRPLATMTEFTKV.IP
652- 726 (51.84/15.19) ......ASALEILHAALGLvGGSPLTALmqwagrsnvlfgvvaavpevQNRPAVGAMFLAwA.LSEiIRYPWYAASLAGA..CP.............
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 74.92| 23| 254| 202| 228| 6
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202- 228 (38.11/31.94) EGVQ..CNIIQDTNG..DACIVEaaapGGKR
454- 480 (36.81/21.02) EGKQttCTITRKAQGahERCDIH....GGWR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 91.83| 18| 27| 538| 555| 8
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518- 535 (29.91/15.84) TPAKAAKTPGRSRASGSG
538- 555 (30.04/15.94) TPRTAEGGVAKRRSSSSA
566- 583 (31.89/17.44) TPASPASGRRGRRSSQGA
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