<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19595

Description "Putative transferase, protein kinase RLK-Pelle-RLCK-IXb family"
SequenceMWYNKGGNAVKMKEGGGGGGNGLVAVAIDKDKGSQNALRWAAESILSRGQTVVLIHVIHRQNATNSLAGANAIIYDSNNPSSSPHKQKLEKMTKDLFLTFHCYCTRKDIQCLDVILEDTDIGKALTEYVSYAAIETLVLGAPSKHGFIRFKSSGMSSSVLKGAPDFCTVYVISKGKPSSQRNASRAAPYRSPLLSHIESLNKQNASKVSETPKHNIYLKAKPSFKPRNLPDDPFRSPFARGGGGFTKGRMSGGFSESESDISFISSDRASTDRASSVMYEYIDQGRGGRLSTSSDHSFGSIPIAPRFGDLNSMNDFSMVSDTSLTSSSWSSQNLEEVEAEMRRLKLELKQTMDMYSTACREALTAKQKEMELNNLKAEEEQKLEEARLAQEAAIAVAEKEKARCRAAMEAADAAKRIAELESQKRAHTEMKALREAEEMSKILNNLANSDTKYRRYSIDEIEAATEHFAPSRKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGRSQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEYMANGSLEDRLKRKGNSPPLSWQLRFRIAAEIVTGLLFLHQTKPEPLVHRDLKPGNILLDHNFVSKISDVGLARLVPAVAENVTQYLMTSTAGTFCYIDPEYQQTGMLGVKSDVYSLGVMLLQMITSRPPMGLTHLVERAIEKDKFAEVLDPDVLDWPVEEALKLAKLALQCAELRRKDRPDLCNVVLPELSKLRELGEENMNIMLSGGSTGPNSTIQFNVSDQQEVMSDPQLKSQSSTSSQAENQEGS
Length788
PositionTail
OrganismRosa chinensis (China rose)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Rosoideae> Rosoideae incertae sedis> Rosa.
Aromaticity0.06
Grand average of hydropathy-0.426
Instability index50.50
Isoelectric point6.64
Molecular weight86966.78
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19595
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.60|      32|      43|     174|     210|       1
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  174-  206 (50.61/27.94)	KGKPS.SQRNASrAAPYRSPLLSHIESLNKQNAS
  219-  251 (54.00/29.52)	KAKPSfKPRNLP.DDPFRSPFARGGGGFTKGRMS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.03|      26|      28|     338|     363|       2
---------------------------------------------------------------------------
  338-  363 (45.11/32.56)	EAEMRRLKLELKQTMDMYSTA..............CREAL
  369-  408 (33.92/22.65)	EMELNNLKAEEEQKLEEARLAqeaaiavaekekarCRAAM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.50|      26|      28|     453|     479|       3
---------------------------------------------------------------------------
  453-  479 (41.32/32.72)	YRRYsIDEIEAATEHFAPSRKIGEGGY
  483-  508 (46.18/31.73)	YKCY.LDHTPVAVKVLRPDAAQGRSQF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.17|      14|      34|     252|     265|       4
---------------------------------------------------------------------------
  252-  265 (25.66/16.18)	GGFSESESDISFIS
  287-  300 (26.50/16.95)	GGRLSTSSDHSFGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     121.04|      36|     243|      55|      91|       5
---------------------------------------------------------------------------
   55-   91 (57.65/42.56)	IHVIHRQNATNSLAGAnAIIYDSNNPSSSPHKQKLEK
  301-  336 (63.39/42.10)	IPIAPRFGDLNSMNDF.SMVSDTSLTSSSWSSQNLEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.31|      28|     650|      19|      46|       6
---------------------------------------------------------------------------
   19-   46 (48.54/34.16)	GGNGLVAVAIDKDKGSQ....NALRWAAESIL
  671-  702 (43.77/30.10)	GLTHLVERAIEKDKFAEvldpDVLDWPVEEAL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19595 with Med32 domain of Kingdom Viridiplantae
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