<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19580

Description Uncharacterized protein
SequenceMGSVELQRRLVELVTEAAKGKEESVVIWAMELGQCVEAAPSIELGEVVVTQLCFRHSKPCLWKFLDFCLSSGLLSPLHVLSLLSARVIPQRRSQPEAYRLFLELLRRYAFSFDPIAPDGHKEKIAESVDLALQLSETYKVRVVEFGHALVLFFFSIIISLIDSTLDDWGLKTSRKRPRLAFGGSSDHDGGIDSIGNEKFISNEHQERIRTMNSFLAIEVLGKLTESRKALVLLRLVHLNMPEKFNGLLQRLRFLEARQFASSDLNSAVQLLARLSVQLQRVLGFEYQLNKRQLIGVLLDIGSQKPPFHFNSGFGPSTCWVPLDIYMENTMDGKQLSIKSAINIHAEGIMKLQVINQASWQETFLALWLSALRLVQRERDPLEGPVPHLESRLCVLLSIVPLAIAKVLEDEANLNSSSLKDTASGNAENGDGHEMNSKANTSRKHGLISSLKVLGNFSGLLCPPSSVSDSANSAATKAARFIHNSNNEKDASGGGSCGDTCIKAGGDMRHLIVEACIARNLIDISAYFWPGYVSASMISPLNTSSVQKSPWSTFMEGAPLRDSLINSLIMTPASSLEEIEKLYHIALNGSQEEKSAAAKILCGASLRSGWNIQEHVVQFVVKLLCPPVPPNHTGPSHLIDHMSMLSAILFEASTVDTVHILSLHGMVPEVAASLIPICEDLGSLKPTSNNKSSMGDESSVYMVFSLAFLFLLRLWKFYRPPLEQFIAERGGAVVGELTLEYLLILHNNHVASAWNETNSSAHQNESASEKPMYIDSYPKLQAWYSQNKSCVASTLSALSSGNPVHEVANKILSMIYWKMTRSRTPSSNSPAPSSGSPVDVGEDVNQRLMLPAWDVLEAIPFVLEAILTACSHGRLSSRDLTTGLRDLVEFLPASLATIISYFSAEVTRGIWKPVPMNGTDWPSPAAILKSVESEIKEILEAVGVSVPSCFTGNISTVILPLPLAALVSLTITFKLEKSVEYIHAVAGLALENCASGCPWPSMPIVGCLWAQKVRRWHHFIVVSCSRSVFTQNKDAVAQLLRSCFSSFFGSHHTSTSLLSSQSSVSGLLGYTIAGCSAHPSVAPGFLYLRSCRTIPVVQYVNNVIVELVSEYACKLASKWASTDSTRLNSTQASLSLAVSKAKEAATLGACLLCVAGGVRLVQELYRETIPTWLLSSKEEKLGKASSVSRVMEGYAMAYLVILAGSIEWGFGDKLPACALSRRASIVGIHMDFLAGVLEGNISLGCDPATWKSYVSCLVGLMVNFAPTWIKDVKVETLRKLAGGLRGWHECELALSLLERGGASAIGSAAELVNVLS
Length1315
PositionTail
OrganismRosa chinensis (China rose)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Rosoideae> Rosoideae incertae sedis> Rosa.
Aromaticity0.07
Grand average of hydropathy0.128
Instability index47.04
Isoelectric point6.66
Molecular weight143341.66
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19580
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     132.23|      39|     265|      77|     122|       1
---------------------------------------------------------------------------
   77-  115 (65.57/34.71)	LHVLSLLSARVIPQRRSQPEAYRLFLELLRRYAFSFDPI
  343-  381 (66.66/35.50)	IHAEGIMKLQVINQASWQETFLALWLSALRLVQRERDPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     248.71|      55|     121|    1035|    1090|       2
---------------------------------------------------------------------------
  984- 1012 (22.75/ 6.06)	............................VAGLaL.ENCASGC.P.WPSM.PivGC.LWAQKV
 1035- 1090 (91.87/49.74)	VAQLLRSCFSSFFGShHTSTSLLSSQSSVSGL.L.GYTIAGCSA.HPSVAP..GF.LYLRSC
 1110- 1154 (63.85/29.79)	YACKLASKWAS.....TDSTRLNSTQASLS........LAVSKA.KEAATL..GA.CLLCVA
 1160- 1216 (70.24/33.44)	VQELYRETIPTWLLS..SKEEKLGKASSVSRV.MeGYAMAYLVIlAGSIEW..GFgDKLPAC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.76|      29|      37|     782|     816|       3
---------------------------------------------------------------------------
  782-  816 (48.04/39.23)	WYSQNKScvastlSALSSGNPVH..EVANKILSMIYW
  822-  852 (49.73/27.94)	RTPSSNS......PAPSSGSPVDvgEDVNQRLMLPAW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     178.66|      57|     284|     619|     686|       5
---------------------------------------------------------------------------
  626-  686 (89.77/74.01)	PVPPNHTG.PSHLIDHMSMLSAI..LFEASTVDTVHILSlhGMVPEVAASLiPICEdLGSLKPT
  912-  971 (88.89/45.84)	PVPMNGTDwPSPAAILKSVESEIkeILEAVGVSVPSCFT..GNISTVILPL.PLAA.LVSLTIT
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19580 with Med33 domain of Kingdom Viridiplantae
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