<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19579

Description Putative Heat shock protein 70 family
SequenceMKNTRALSLTFLLLFLSEFLCGIALAAESSSKPETVIGIDLGTTYSCVGVYRNGNVDIIVNDQGNRITPSWVAFTDTERLIGEAAKNQAPQNSERTIFDVKRLIGRRFNDPEVQRDIKFLPYKVVNRDGKPYIQVKVKGEDKVFSPEEISAMILSKMKETAEAYLGKKITRAVVTVPAYFNDAQRQATKDAGIISGLIVERIINEPTAAAIAYGLDKKGEKNILVYDLGGGTFDVSILSIDNGVFEVRSTSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKAIGKLRKECERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNIDLFKKTMGPVKQALQDAGLKKTDIDEIVLVGGSTRIPKVQQLLKDFFDGKELNKGVNPDEAVAYGAAVQGGVLSGEGEEGIKDLLLIEAAPLSLGIETAGGVMTKLIPRGTTIPTKKSQIFTTYQDQQTTVSIKVFEGERSLTKDCHELGKFDLTGIPPAPRGVPQIEVTFELDANGILQVKAEDKAAKKSQSITITNDKGRLSQEEIERMVKEAEEFAEEDKKLREKIDARNKLETYIYNMRSTIGDKDKLADKIDSDDKENIENTLKEALEWLDDNQNAEKDDFDEKLKEVEAVCNPVIKQVYEKSGGSSAGSQEDEDEPNDEL
Length661
PositionUnknown
OrganismRosa chinensis (China rose)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Rosoideae> Rosoideae incertae sedis> Rosa.
Aromaticity0.06
Grand average of hydropathy-0.474
Instability index35.14
Isoelectric point5.07
Molecular weight73386.26
Publications









Function






Annotated function


GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19579
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.79|      20|      26|     559|     583|       1
---------------------------------------------------------------------------
  576-  597 (29.74/25.44)	NMRSTIGD......kdKLADKIDSDDK.E
  598-  626 (21.04/10.99)	NIENTLKEalewlddnQNAEKDDFDEKlK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.22|      14|      27|     395|     408|       5
---------------------------------------------------------------------------
  395-  408 (23.37/14.22)	EAV...........AYGAAVQGGVL
  414-  438 (15.85/ 7.39)	EGIkdlllieaaplSLGIETAGGVM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.83|      14|      26|     323|     336|       8
---------------------------------------------------------------------------
  323-  336 (23.38/15.45)	EPLTRARFEELNID
  347-  360 (22.45/14.54)	QALQDAGLKKTDID
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.32|      13|      26|     105|     121|       9
---------------------------------------------------------------------------
  105-  121 (19.38/19.90)	GRrfndPEVQRDIK.....FLP
  129-  146 (18.94/ 8.64)	GK....PYIQVKVKgedkvFSP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19579 with Med37 domain of Kingdom Viridiplantae
Unable to open file!