<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19569

Description Uncharacterized protein
SequenceMEVSGIWDSVVELTKVAQQKGSDPLVWVIQLSSNLGSRGVSMPSVELANVLVSHICWENNVPIMWKFLEKALMLNIVPPMLVLALLSKRVIPSRCSQPVAYRLYMELLKRHIFTLKSQINGPNNQMIMKSIDSVLHLSGIFGLPVSEPGVLVVEFLFANVWQLLDASLDDEGLLNRTLEKKSRWEIEHQEMEIDYHGSYYEKRREYNEIMQDANTVMAIEIIGQFLQSKVTSRILYLARRHLPAHWTSFIQRLQLLASNSLAIRNSKTLTPEALMLLTSSSHFVLSREYKTSSLQKFHAVMASGSLVSSGLCNGASRSALWLPLDLVLEDAMDGYQVDATSAVENITGLINTLQAINGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRLDTRLCMLLCITTLVVANLIEEETLPTNEVECGSINSWKEKELPGNRRHDLVSSLQVLGDYQGLLTPPQSVVSAANQAAAKAMLILSGVSIGSAYFECISMKEMPINFSGNMRHLIVEACIARNLLDTSAYSWPGYVNGRINQLPHGVPTQVPGWSTFMLVATLTPVVVNALVSTPASSLAEIEKVFAIAINGSDDEKISAATILCGASLLRGWNIQEHTAHFIIQLLSPPVPADYSGSDSHLIGYAPMLNVLIIGIASVDCVQIFSLHGLVPQLACSLMPICEVFGSCVPNFSWTLATGEEISAHAVFSNAFTLLLKLWRFNHPPLEHGVGDVPTVASRLTPEYLLSVRNSYLVSSVTAHQDRNKRRLSAVATSSYPEPVFVDSFPKLKVWYRQHQACIASTLSGLVHGTPVHQIVDELLNMMFKKISRGNQSGTSVNSPSGSSSGPGNEDNSLRPKLPAWDILEAVPFVVDAALTACAHGRLSPRELATGLKDLADFLPACLATIVSYFSAEVTRGIWKPVFMNGTDWPSPAVNLSYVEEQIKKILAATGVDIPSLAAGTSSPATLPLPLAAFVSVTITYKIDRASERFLSLAGPTLESLAAGCPWPCMPIVASLWTQKAKRWSDFLVFSASRTVFLQNSQSVVQLLKSCFTATLGLDATPTSSNGGVGALLGHGFGSHFCGEISPVAPGILYLRVYRSIADIVFMTEEIVTILMHSVREIACSVLPKSKTTNGMRYGQVSLATAMTQVKLAASLGASLVWLTGGLCLVQSLIKETLPSWFISMHWSEQKQGSEGMVAMLGGYALAYFAVLCGAFAWGVDSSSAASKRRPKILGTHMEFLASALDGKISLGCDSATWRAYVSGFVTLMVGCTPNWMLEMDVQVLKRLSNGLRKWNEEELAIALLEIGGVGTMGAAAELIVENEM
Length1315
PositionTail
OrganismRosa chinensis (China rose)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Rosoideae> Rosoideae incertae sedis> Rosa.
Aromaticity0.08
Grand average of hydropathy0.219
Instability index44.10
Isoelectric point6.18
Molecular weight143293.27
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19569
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     146.38|      48|      98|      18|      75|       1
---------------------------------------------------------------------------
   18-   75 (73.27/72.75)	QQKGSDPLVW......VIQLSSNLGSRgVSMPSvelanVLVSHICWENnvpiMWKFLEKAL....MLN
  118-  175 (73.11/46.93)	QINGPNNQMImksidsVLHLSGIFGLP.VSEPG.....VLVVEFLFAN....VWQLLDASLddegLLN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|    1137.34|     367|     402|     280|     671|       2
---------------------------------------------------------------------------
  280-  671 (569.36/373.85)	SSHFVLSREYK.TSSLQKF.HAVMASGslvSSGLCNGASRsalwLPLDLVLeDAMDGYQVDATSAVENITGliNTLQAINGTSWHDTFLGLWIAALRLVQRERDP.IEGPVPRLDTRLCMLLCITTLVvaNLIEEETLPTNevECG.SINSWK.EKELPGNRRHDLVSSLQVLgdyqGLLTPPQSVVSAANQAAAKAML....ILSGVSiGSAYFECISMKEMPINFSGNMRHLIVEACIArNLLD.TSAYSWPGYVNGRINQL..PHGV..PTQVPGWSTfmlVATLtPVVVNALVS.TPASSLAEIEKVFaIAINGSDDEKISAATIL.CGASLLRGWNIQ.EHTAHFIIQLLSPPVPADYSGSDSHLIG..YAPMLNVLIIGIASVDCVQIFSLHGLVPQLACSLMPI
  693- 1078 (567.98/314.36)	SAHAVFSNAFTlLLKLWRFnHPPLEHG...VGDVPTVASR....LTPEYLL.SVRNSYLVSSVTAHQDRNK..RRLSAVATSSYPEPVFVDSFPKLKVWYRQHQAcIASTLSGLVHGTPVHQIVDELL..NMMFKKISRGN..QSGtSVNSPSgSSSGPGNEDNSLRPKLPAW....DILEAVPFVVDAALTACAHGRLspreLATGLK.DLADFLPACLATIVSYFSAEVTRGIWKPVFM.NGTDwPSPAVNLSYVEEQIKKIlaATGVdiPSLAAGTSS...PATL.PLPLAAFVSvTITYKIDRASERF.LSLAGPTLESLAAGCPWpCMPIVASLWTQKaKRWSDFLVFSASRTVFLQNSQSVVQLLKscFTATLGLDATPTSSNGGVGALLGHGFGSHFCGEISPV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     110.97|      36|     155|    1111|    1148|       3
---------------------------------------------------------------------------
 1111- 1148 (54.67/50.67)	EIACSVLpkSKTTNGMR.YGQVSLATAMTQVKLAASLGA
 1269- 1305 (56.31/43.76)	EMDVQVL..KRLSNGLRkWNEEELAIALLEIGGVGTMGA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19569 with Med33 domain of Kingdom Viridiplantae
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