<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19425

Description Uncharacterized protein
SequenceMQRYHAPSCTSAVNNSAIGGASVRDTPRADSSSLPPNFSLNSRRQSQLAPYKLKCDKEHLNSRLGPPDFHPQTQNCPEETLTRENVQHGYKDTIDGLEWATCDYRDFRTAPPSDVKFTGSKDFSQIYLAIQLLKLKMKELQKKLKKERASRKNTSQQNSYSSKDLLGDTHEAKSNGKCLNGRRRNFSDIFDSPGPLHDIIVCWIDQHEGHKGEGSKRLQLFMLELIRSGIFYPQAYVRQLIVSGIIDTNGPMADLNRRKRHQRILKQLPGQFMVNALEEARIAEGSELLEAINVYSNERRLVLQELFFDSYNNTNNSHALAKKLNCHSTSGRDVDSQVSCDKRRTVQASKTFRREVDLEELKASISVLLQFPSSSFCSADSGVDESQGSIKRSIGSTHSKMDSVEGTPGCEDCKRVKRQKLSEDKSSCLQVSSPIPSDDEDTWWVRKGPKNLEGSKVDPLLKSTKQASRGRQKPVRKTQSLAQLAAARIEDSQGASTSHVCDNKISCPHHRTEVENLKPVDGIRTTHHADIISIGRGLKQLRFVEKRVVTIWLLSVVRQLVEESEKSFPKASQYGRPFVAADEKSPLRWKLGEDELSAILYLLDVSCDSASAVKFLLWLLPKAISNPSPAIHSGRNILMVPRNVENYACEVGEAYLLSSLRRYENILIAADLVPEALSATMRHVASFMATNGRITGSGALVFACYLLRRYGSIASVIEWEKNFKGTCDKRLLSELESGRTEGEFGFPHGVPAGTEDPDDYCRQRINVGRLSRVGANMRDMVQRHIDDVLHYILGKERKHFAANAPKSPATEKGDDDYQVAQQIIMGLMDCFRQTGGAFQEGDPGLVSSAVSAIVSNVGPTLAKIPDFTSGSTYSNYQPPMNSLNFAKRILHIHLICLCLLKEALGERKSQAFEIALATEAFSALAVAFAPAKSSRGQLLSPDSLDSHTNISNDNSHSSAKATLGRTTKMAAVSALVIGAIIHGVISLERMVSVLRLKEGLDVVQFVRSTKTSSNGNARSVGAFKVDNSVEVYVHLFRLFVGNCRTVCDGLVLELLGEQSVLALSRMQRLLPINLVFPPAYAIFAFMIWKPFILNSNTARSEDIHQLYQSLTMAIGDAIKHRPFRDVCMRDTRGFYDIVAADTTDAEFAAMLELNGLDMHLKSMAFVPLRARLFLNAIIDCKMPNSAFTQDDGNRVSGHSESKALRAETSKLLDKLVCALDTLQPAKFHWQWVELRLLLNEQALIDKIENHDMSLVDAIRSSSPSSERASPSESEKVFIEIILTRLLVRPDAAPLFSEVVHLFGRSLEDSMLMQAKWFLGGLDVLLGRKTVRQRLSNIAENKNLSTKSQFWKPWGWSYSGADPVTNSGEKRKSEVTSLEEGEVIEEGMESKGCVKGSTQVDIEGSGINQQHVTEKAFIELVIPCIDQSSADSHNTFASDLIKQFNTIEQQINSVTRGVSKQTGTASSGIEGPTNKINNRKGIRGGSPGLAKRTPAPVESAPPPSPAALRASMSLRLQFIVRLLPIICADLRRFIVGLFREPSARSMRNMLASVILRLLGSRVVHEDVDLSSNLAQLKRDMELMPIVASTEMSGDSLFDRLLLVLHGLLSSCKPSWLKSKDAKDFSGFDREAVEGLQNELDSMQLPEMIRWRIQAAMPILFPSFHNTVSCQPPSVPIGALSLLQPSICVPGSYTGTINPPSVPIGALSLLQPSICVPGSYTGTINPPQRQVASARNANNMPGKSKSVLSQENDMEIDPWTLLEDGAGSGPSSSSTAAIGGSDNANLRASSWLKGAVRVRQTDPSYIGAVDDDS
Length1811
PositionKinase
OrganismGossypium barbadense (Sea-island cotton) (Egyptian cotton)
KingdomViridiplantae
Lineage
Aromaticity0.06
Grand average of hydropathy-0.303
Instability index50.14
Isoelectric point8.54
Molecular weight199677.20
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19425
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.61|      26|      26|    1673|    1698|       1
---------------------------------------------------------------------------
 1673- 1698 (58.81/37.84)	VPIGALSLLQPSICVPGSYTGTINPP
 1700- 1725 (58.81/37.84)	VPIGALSLLQPSICVPGSYTGTINPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     135.24|      43|     434|    1169|    1228|       2
---------------------------------------------------------------------------
 1169- 1212 (68.54/46.39)	RARLFLN..AIIDcKMPNSAFTQDDGNRVSGHSESKALRAETSKLL
 1233- 1277 (66.70/60.36)	ELRLLLNeqALID.KIENHDMSLVDAIRSSSPSSERASPSESEKVF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.68|      38|     434|     331|     409|       3
---------------------------------------------------------------------------
  352-  391 (55.42/75.55)	FRREVDLEELKASISVlLQFPSSSFCSADsGVDESQGSIK
  987- 1024 (62.26/15.95)	LERMVSVLRLKEGLDV.VQFVRSTKTSSN.GNARSVGAFK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     137.33|      46|     264|     136|     183|       8
---------------------------------------------------------------------------
  136-  183 (73.74/50.61)	KMKELQ........KKLKKERASRKNTS..QQNS.YSSKDllGDTHEAKSNGKCLNGRR
  400-  456 (63.59/37.79)	KMDSVEgtpgcedcKRVKRQKLSEDKSSclQVSSpIPSDD..EDTWWVRKGPKNLEGSK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.71|      36|     264|    1088|    1129|       9
---------------------------------------------------------------------------
 1088- 1129 (60.58/60.88)	WKPF.........ILNSNTARSEDIHQLYQsltmaiGDAIKHRPFRDVCMR
 1350- 1394 (56.13/41.82)	WKPWgwsysgadpVTNSGEKRKSEVTSLEE......GEVIEEGMESKGCVK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     118.58|      27|      73|     193|     219|      11
---------------------------------------------------------------------------
  193-  219 (50.16/34.44)	PGPLHDIIVCWIDQHEGHKGEGSKRLQ
  234-  258 (33.90/20.63)	QAYVRQLIVSGIIDTNGPMADLNRR..
  269-  290 (34.52/21.16)	PG...QFMVNALE..EARIAEGSELLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     101.03|      30|      56|     738|     768|      13
---------------------------------------------------------------------------
  738-  768 (54.93/35.59)	GRTEGEF..GFPHGvPAGTEDPDDY.CRQRINVG
  794-  826 (46.10/25.26)	GKERKHFaaNAPKS.PATEKGDDDYqVAQQIIMG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.66|      34|     434|     478|     535|      15
---------------------------------------------------------------------------
  309-  345 (50.64/22.67)	DSyNNTNNSHALAKKLNC.HSTSgrDVDSQVSCDKRRT
  491-  525 (57.02/53.18)	DS.QGASTSHVCDNKISCpHHRT..EVENLKPVDGIRT
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19425 with Med12 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) NPPQRQVASARNANNMPGKSKSVLSQENDMEIDPWTLLEDGAGSGPSSSSTAAIGG
2) NSVTRGVSKQTGTASSGIEGPTNKINNRKGIRGGSPGLAKRTPAPVESAPPPS
3) SKVDPLLKSTKQASRGRQKPVRKTQSLAQLAAARI
1723
1451
455
1778
1503
489










Molecular Recognition Features






MoRF SequenceStartStop




1) PSYIGAVD
1801
1808