<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19403

Description "Phosphorylase kinase, gamma catalytic subunit"
SequenceMWLPKNQTEKKGGNGLVAVAIDKDKNSQNALKWAIDNILQRGQTVILIHVKLKPISYSSVPSISTYNSKFSTADDSTIICKEPDSQTKELFLPFRCFCSRKDIQCKDIMLEDTDVAKALIEYVSQAAIENLVLGATVKTGFLRFKITDIPGSVGKGAPDFCNVYVISKGKIQSMRSAVRPAPANSALRSQILKQPSPKAEPVLEPNVLPPPSTKGQFCHHLHAAFFVSFDPAIDHFLDPVSVFEKPPEPPRKSYDEIESIRSPFTRRGPNGMSYGELPALPDSDISFVSSSGRPSSGGRPSVDRMYPLLYDNLDSGRTTPRMSNSTDIDLNHSFESLQYGRRSVDTGTPSEFSSFSQDSDILSSSSPAMDDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKKDEERRLEEARLAEEAALAIADKERAKSKAAIEAAEAARRIADLEAQKRVNAELKAVRESEERKKVIDALSKTDTRYRRYSIEEIEAATGFFEQSRKIGEGGYGPVYKCYLDHTPAAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLFCRGNTPPLSWQLRFRIAAEIGTGLLFLHQSKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSIADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITARPAMGLTHHVDRAIEKGVFAQMLDPSVPDWPIEEALSFAKLSLKCAELRRKDRPDLANVVLPELNRLRAFAEDNMQLPFSASDGSPTSIRSQFSVEHSSFASSNASSRTTSTTLMSQ
Length819
PositionTail
OrganismTrema orientale (Charcoal tree) (Celtis orientalis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Trema.
Aromaticity0.07
Grand average of hydropathy-0.374
Instability index53.68
Isoelectric point7.18
Molecular weight91007.61
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19403
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     123.04|      35|      73|     250|     291|       1
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  250-  291 (59.15/46.09)	PRKSYDeiesirsPFTRRGP...NGMSYGE.LPALP.DS.DI....SFVSSS
  298-  336 (29.98/13.34)	GRPSVD..........RMYPllyDNLDSGRtTPRMS.NStDIdlnhSFES..
  338-  365 (33.92/14.13)	.............QYGRRSV...DTGTPSE.FSSFSqDS.DI......LSSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.71|      18|      18|     415|     432|       2
---------------------------------------------------------------------------
  415-  432 (28.56/19.89)	ERRLEEARL.AEEAALAIA
  435-  453 (24.15/15.69)	ERAKSKAAIeAAEAARRIA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.76|       9|     450|     201|     219|       5
---------------------------------------------------------------------------
  191-  199 (16.33/12.62)	ILKQPSPKA
  207-  215 (17.42/10.16)	VLPPPSTKG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     100.15|      33|     453|     121|     156|       6
---------------------------------------------------------------------------
  121-  156 (49.67/42.93)	EYVSQAAIENLVL..GATVKTGF.LRFKITdipGSVGKG
  574-  609 (50.49/34.16)	EFMANGSLEDRLFcrGNTPPLSWqLRFRIA...AEIGTG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19403 with Med32 domain of Kingdom Viridiplantae
Unable to open file!