Description | Transcription elongation factor |
Sequence | MAKKSGSLDYWRNYFRTANSDIFDIIDHAIMVAASDCPKEFRLRRDRITERLFCCRLTRCSGCDHVELAVPGGGDDGEDSDDGGFKSDFDRDGGEEFEAGASKESKVNTSRDDRAENQVSNFSYGDAEALTDEIEEESQIVGEVLRIKEILHNCEEETESVLFDSLRKLQLMALTVDTLKATEIGKAVNGLRKHSSKEIRHLARTLIDVWKDMVDEWVSSTAAIASMNCTEGTPDSVNPSVVDDEEEEGLPSPPLDEGAFFAAQTTSMELSGFFDGMDDDGSELTLPSNASIR |
Length | 293 |
Position | Unknown |
Organism | Trema orientale (Charcoal tree) (Celtis orientalis) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Trema. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.539 |
Instability index | 43.40 |
Isoelectric point | 4.38 |
Molecular weight | 32376.26 |
Publications |
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell |
GO - Biological Function | translation elongation factor activity GO:0003746 IEA:UniProtKB-KW |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP19400 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 218.79| 71| 186| 12| 95| 1 --------------------------------------------------------------------------- 12- 95 (110.77/72.24) RNYFRTAnSDIF.DIIDHAI....MVAASDCPKEfrlRRDRITERLFccrltrcsgCDHVELAVPGGG.DDG.......EDSDDGGFKSDFDRDGGE 200- 283 (108.02/48.24) RHLARTL.IDVWkDMVDEWVsstaAIASMNCTEG...TPDSVNPSVV.........DDEEEEGLPSPPlDEGaffaaqtTSMELSGFFDGMDDDGSE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 55.15| 17| 18| 130| 146| 2 --------------------------------------------------------------------------- 130- 146 (26.38/16.33) LTDEIEEESQIVGEVLR 151- 167 (28.77/18.39) LHNCEEETESVLFDSLR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) AFFAAQ 2) ELTLPSNASIR 3) YWRNYFR | 259 283 10 | 264 293 16 |
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