<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19396

Description "Phosphorylase kinase, gamma catalytic subunit"
SequenceMALLRTSSKLGDASTVIAIDRDKQIGQSLVKWAVDNLLRGHKKSHCVIIHVINHDTTNSSNNKGGGRSSTDDLQQLFLPCLGYCARKGIAAKEVVLHDIDVPSAIVDYIVKNDISNVVVGASNHNALIRTLSSLGSLIGARSEKLSANRSNNFTSLASPNDNKTNSGANSSIVSITSSLQGYPSSVSSDFSGLSSFQSTLHSLQSTTTSNSLDSFTSLESSANSFITPDELEAEMSRLNLQLKQTMDIYNSLRDESAEAKKRANELQLKPTNERNLEEAKMAEEAANGLADLERQKTKVATEAAHIAERIAEIETQKRKSAEMKAKQEAEELNAMHGGVKYRRYPIKDIESATDYFNNNRKIGEGGYGPVYKGFLDHTPVAIKILRPDISQGLIQFQQEVEVLSSIRHPNMVLLVGACPEYGCLVYEYMENGSLDDRLFCKDNTPPLPWRHRFRIAAEIATALLFLHQRKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPAFAANSVTQYHQTTAAGTFCYIDPEYQQTGLLGVKSDVYSLGVMLLQIITSRPPIGLSYQVEESIEQGTFSEVLDPAVTDWPVEEALSFAKLALQCCEMRKRDRPDLGSVVLPELIRLSKLGIEDCSNEERY
Length636
PositionTail
OrganismTrema orientale (Charcoal tree) (Celtis orientalis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Trema.
Aromaticity0.06
Grand average of hydropathy-0.335
Instability index44.18
Isoelectric point5.91
Molecular weight70165.49
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19396
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.52|      28|      61|     131|     158|       1
---------------------------------------------------------------------------
  131-  158 (45.12/24.26)	LSSLGSLIGARSEKLSANRSNNFTSLAS
  193-  220 (46.40/25.12)	LSSFQSTLHSLQSTTTSNSLDSFTSLES
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      55.07|      14|      63|     253|     266|       2
---------------------------------------------------------------------------
  253-  266 (23.34/14.84)	RDESAE..AKKRANEL
  277-  289 (14.84/ 6.95)	.EEAKM..AEEAANGL
  317-  332 (16.88/ 8.84)	KRKSAEmkAKQEAEEL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19396 with Med32 domain of Kingdom Viridiplantae
Unable to open file!