<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19374

Description Uncharacterized protein
SequenceMSMLYAILKEASYIDTVHILSLHGVVPEVAASLVPLCEVFGSLEPASTNKSSKGDEPTVYMVFSLAFLFLLRLWKFYRPPLEQGITEHARAFRGELTLEYLLLLRNSRTASFQYETNGNPDEIECITDKAIYIDFYPKLRSWYCQNKSCVASTLSGLSSESPPVHEVSNKILNMIYSKMTKTGSTSSGSPASTGEDVCQRPMLPAWEVLEAIPFVLEAILTAYAHGRLSSRNLTIGLRELVDFLPASLATIISYFSAEVTRGIWKSVPMNGIDWPSPTAILLSVESEIKEILGAVGVNIPSYSYEVSQIMLPLPMAALVSLTITFKLDKSLEYIHAVAGPALENCASSCPWPSIPVIGCLWAQKVRRWHDYIVVSCSRAVFRHNKEAVAQLLRSCFNAFLGSQHVATPSLSNQSSMNGLLGFTISACSERPFVAPGFLYLRSCRTIQIVQYVNDVIVGLVAEYARDSSVRWPSTVSSRLKSSQASLCLAAAMAKKVATLGASLLCIAGGFQLVQELYMDTIPTWLLSSNEAQAKHGEMSALSCVVEGYAMAYLLILSGSVMWGIQAKLPMCLFTRRARILGIHMDFLAGVLEGKISLGCHPATLKAYVSCLVGLMVKFSPAWIQEVKLETLRTLASGLRGWHECELALSLLERGGAAAMGSAAELANVIARV
Length672
PositionTail
OrganismTrema orientale (Charcoal tree) (Celtis orientalis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Trema.
Aromaticity0.09
Grand average of hydropathy0.298
Instability index50.77
Isoelectric point7.48
Molecular weight73419.69
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19374
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     155.56|      50|     107|     497|     551|       1
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  497-  551 (74.68/61.46)	ATLGASLLCIAG.......GFqlVQELYMDTIPTwlLSSNEAQAKHGEMsALSCVVEGYAMA
  602-  658 (80.89/48.96)	ATLKAYVSCLVGlmvkfspAW..IQEVKLETLRT..LASGLRGWHECEL.ALSLLERGGAAA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     297.73|      98|     107|     197|     303|       2
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  197-  303 (146.41/113.41)	VCQrPMLP...AWEVLEAIPFVLEAILtAYAHGRLSSrnltiGLRELVDFLP.ASLATIISYFSAEVTRgiWKSVPM....NGIDWPSPTAILLSVESEIKEILGAVGVNIPSYS
  306-  411 (151.32/93.01)	VSQ.IMLPlpmAALVSLTITFKLDKSL.EYIHAVAGP.....ALENCASSCPwPSIPVIGCLWAQKVRR..WHDYIVvscsRAVFRHNKEAVAQLLRSCFNAFLGSQHVATPSLS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19374 with Med33 domain of Kingdom Viridiplantae
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