<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19373

Description Uncharacterized protein
SequenceMEWSEYERRVVETVKWCQERNESPLVWAMEVGKWAEQAPSPELGQVLVSLLCFQNNTPSLWKFLQQAMSSGLLFPLQLLSLLSASIIPHRRSQPEAYTLYLQLLSRYALSFNPALPDVNKEKIIKSVDHALRLSQTYDVRILELGHVFVLFFFSIITSLIDSVLDDWGLQKTSSDKPSLAFGSTDSKDMDIDSRENHDWVRKEHREEMRIMNSFLAMEVLGKLTESRKALLLLRLVHFNMPKRFNDLLCSLQLFKGHQLASLDLKPAMQLLARFSANIQRVMDFEHRLDKRQLIGMLVDKGSCKPVPHCNFDSDFSACWVPFDIYMENVMDGKQLLVKSAIDVIAEVVKTLQVLNQATWQETFLALWLSALRLVQRERNPLEGPLPHLEARLCILLSVVPLAIAKVLEDESETKVYSSSALGSTVSADETNEKAPALRKHGLISSLQVLGQFSGILCPPASVVNAANIAATKAARFLHHSKNEKDGVGYGSRGQSLIKAGGNMRHLIVEACITRNLIDASAYFWPCYVSASAMAPSDTSPVQKSPWSTFMEGAPLCGSLINSLVATPASSLAEIEKLYHIALNGSEEEKSAAAKILCGASLRIGWNIQDVM
Length611
PositionTail
OrganismTrema orientale (Charcoal tree) (Celtis orientalis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Trema.
Aromaticity0.08
Grand average of hydropathy-0.012
Instability index46.43
Isoelectric point6.45
Molecular weight68227.12
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19373
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.82|      17|      19|      37|      53|       1
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   37-   53 (30.79/19.40)	QAPSPE....LGQVLVSLLCF
   54-   74 (25.03/14.46)	QNNTPSlwkfLQQAMSSGLLF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.35|      19|      19|     533|     551|       2
---------------------------------------------------------------------------
  533-  551 (34.67/20.19)	MAPSDTSPVQKSPWSTFME
  555-  573 (28.68/15.51)	LCGSLINSLVATPASSLAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      59.95|      13|      24|      76|      88|       9
---------------------------------------------------------------------------
   76-   88 (21.24/11.02)	LQLLSLL...SASIIP
  101-  113 (22.59/12.14)	LQLLSRY...ALSFNP
  251-  266 (16.13/ 6.76)	LQLFKGHqlaSLDLKP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.65|      17|      17|     494|     510|      10
---------------------------------------------------------------------------
  494-  510 (28.43/17.15)	QSLIKAGGNMRHLIVEA
  514-  530 (32.22/20.30)	RNLIDASAYFWPCYVSA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19373 with Med33 domain of Kingdom Viridiplantae
Unable to open file!