<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19354

Description "Phosphorylase kinase, gamma catalytic subunit"
SequenceMARGGGAEKKEEVVVVAIDKDKSSQYALKWTVDHLITRGQTITLLHIKNKTSSVPNPCKILSFMLVQTIVVYKNGILMRALSVSDMTLWCGAVGSFISVNEVCEDVARTYKQQMESQAKDLFLPFRCFCTRKDIKCNEVILEEGDISKAIMNYVAVNSIETLVLGAASRNSLVKRFKPTDVPSTVSKVAPEFCTVYVIAKGKISSVRSASASTPTRASTRNHTHNHMQQQHRASDRAHHVPHNPYPPQDELEMRSPFTRGKHSMNKSYELSHDSDISYVSSGRPSMDHLFPSLYDSNESGMSPRMSTSSDFDMLKNFASSLSSGHKSIDLSSSHYDFSHNSHDSGKSSSSQNSHMDEVEAEMKRLRLELKQTMDLYSTACKEALSANKKAIELHRWKMEEEQKLEEARLAEEAALALAEKEKAKCKAAIEAAEAAQRLAELEAQKRIHAEMRAQKEAEERKKALGGFAQGEIRYRKYTIEEIETATQDFAESRKIGEGGYGPVYRGELDHTPVAIKILRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLEDRLFRRGNTPVLSWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTATAGTFCYIDPEYQQTGMLGIKSDIYSLGVLFLQMITAKPPMGLTHHMERAIERGTFEEMLDPAVTDWPLEEALNFAKLALQCSEMRRKDRPDLGKIVLPELNRLRELAEDNMFGNGASYDLAGLASKQGSVSTSSQVVISDPQLQHSESDSSRSRSSTSSSTERI
Length816
PositionTail
OrganismTrema orientale (Charcoal tree) (Celtis orientalis)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Trema.
Aromaticity0.06
Grand average of hydropathy-0.439
Instability index49.05
Isoelectric point6.83
Molecular weight91078.48
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19354
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.58|      18|      19|     450|     468|       1
---------------------------------------------------------------------------
  450-  467 (32.50/20.30)	EMRAQKEAEERKKALGGF
  483-  500 (30.08/13.73)	ETATQDFAESRKIGEGGY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.06|      24|      28|     361|     388|       2
---------------------------------------------------------------------------
  361-  384 (39.71/31.50)	EMKRLRLELKQTMDLYSTACKEAL
  392-  415 (39.36/20.95)	ELHRWKMEEEQKLEEARLAEEAAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     114.93|      31|      58|     250|     280|       3
---------------------------------------------------------------------------
  250-  280 (55.79/30.55)	ELEMRSPFTRGKHSMNKS.......YELSHDSDISYVS
  282-  302 (29.12/12.82)	..........GRPSMDHL.......FPSLYDSNESGMS
  310-  341 (30.02/13.42)	DFDMLKNFASSLSSGHKSidlssshYDFSHNS......
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19354 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DLSSSHYDFSHNSHDSGKSSSSQNSHMDEVEAEMKR
2) RSASASTPTRASTRNHTHNHMQQQHRASDRAHHVPHNPYPPQDELEMRSPFTRGKHSMNK
3) STSSQVVISDPQLQHSESDSSRSRSSTSSSTERI
329
207
783
364
266
816










Molecular Recognition Features






MoRF SequenceStartStop




NANANA