<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19349

Description Heat shock protein 70 family
SequenceMASKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVNYKGEEKQFAAEEISSMVLVKMKEIAEAYLGQTIKNAVITVPAYFNDSQRQATKDAGAISGLNVMRIINEPTAAAIAYGLDKKASRSGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSHVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNERVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEQMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDEKIAGKFDPADKQKIEKAIDETIEWLDGNQLAEVDELEDKLKELEGLCNPIIAKMYQGGGGDVPMGGAAEMPCGGYGNASSGGAGAGPKIEEVD
Length655
PositionUnknown
OrganismParasponia andersonii (Sponia andersonii)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Parasponia.
Aromaticity0.06
Grand average of hydropathy-0.412
Instability index33.63
Isoelectric point5.18
Molecular weight71740.40
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19349
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.12|      11|      21|      42|      53|       1
---------------------------------------------------------------------------
   42-   53 (15.93/13.81)	PSYVAFtDTERL
   66-   76 (20.19/12.11)	PQNTVF.DAKRL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     142.34|      48|     104|     453|     507|       2
---------------------------------------------------------------------------
  453-  507 (74.20/66.21)	RARTKDNNLLGKFEltgipPAPRgvPQINVCFD.....IDANGILNVSA.EDK...TAGVKNKI
  556-  612 (68.14/43.50)	RNTIKDEKIAGKFD.....PADK..QKIEKAIDetiewLDGNQLAEVDElEDKlkeLEGLCNPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     136.32|      45|     189|     170|     218|       3
---------------------------------------------------------------------------
  170-  218 (63.77/59.54)	GLNVMRIINePTaAAIAYGLDKKAS.RSGEQNVLIFDLggGTFDVSLLTI
  362-  407 (72.54/49.76)	GKELCKSIN.PD.EAVAYGAAVQAAiLSGEGNERVQDL..LLLDVTPLSL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19349 with Med37 domain of Kingdom Viridiplantae
Unable to open file!