<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19343

Description Heat shock protein 70 family
SequenceMAGSWRARGSLIVLAIVFFGCLFAISIAKEEASKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTETERLIGEAAKNQAAVNPERTIFDVKRLIGRKFDDKEVQKDMKLFPYKIVNKDGKPYIQVKIKDGEVKVFSPEEISAMVLTKMKETAEAFLGKKIKDAVVTVPGLSYFLVLCTXIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDGGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKSQIHEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRNLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIEAATKEALDWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGGSADDDESHDEL
Length661
PositionUnknown
OrganismParasponia andersonii (Sponia andersonii)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Parasponia.
Aromaticity0.06
Grand average of hydropathy-0.382
Instability index28.77
Isoelectric point5.19
Molecular weight72725.89
Publications









Function






Annotated function


GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19343
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.98|      18|      21|     578|     597|       1
---------------------------------------------------------------------------
  578-  595 (28.97/21.83)	KNQINDKDKLADKLESDE
  612-  629 (29.01/14.55)	DNQSAEKEDYEEKLKEVE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     213.01|      71|     168|     316|     391|       2
---------------------------------------------------------------------------
   93-  119 (24.96/ 7.54)	............................................................V...NPERTIFDVK..................RLIGRKFD...............DKEVQKDM
  124-  181 (46.63/22.14)	YKIVnkD.GKPYIQVKIKDGEVKVF....SPEEiSAMvltkmketAEAFLGKKIKDAVVTV...PG.........................................................
  205-  284 (32.17/11.98)	..............................PTA.AAI........A.YGLDKKGGEKNILVfdlGGGT..FDVSiltidggvfevlatngdtHLGGEDFDqrimeyfiklikkkhGKDISKD.
  316-  391 (109.25/72.99)	FDGV..DfSEPLTRARFEELNNDLFrktmGPVK.KAM........EDAGLEKSQIHEIVLV...GGSTRIPKVQ..................QLLKDYFD...............GKEPNKGV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.40|      20|      22|     488|     509|       3
---------------------------------------------------------------------------
  490-  509 (37.00/25.97)	TGI...PPAPRGTPQIE.VTFEVD
  511-  534 (24.40/ 8.78)	NGIlnvKAEDKGTGKSEkITITND
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.81|      15|      22|     412|     426|       4
---------------------------------------------------------------------------
  412-  426 (26.02/16.59)	GGEETKDILLLDVAP
  435-  449 (27.79/18.21)	GGVMTKLIPRNTVIP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19343 with Med37 domain of Kingdom Viridiplantae
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