<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19340

Description "Phosphorylase kinase, gamma catalytic subunit"
SequenceMAPQYYPDDTIPPVNSTVVAVEKDNKNSKAAVRWAIEHLVISNPFIILIHVRHKSYQSTSNGDSGESDLHAIFSPFRAYCARKAVQMKEVVIDDSDVSKAILDYVNKNCITNVVAGASQRNALTRKFKGIDVPSSIVKSAPDFCSVFVISKGKLVSARNAQRPALNSAAPPRQPSPQGLPPCIPTEYGDAEHGARAHTRGVLRSGGPEKIIPVRERTKSAPSLLLLDNIDLPSNDSRSSYSRDSTSDASDILAAFGTFGSVDITGKNFDFGTAPSSPRHSSARQSTQRDIEAEMKRLKLELKQTMDMYSSACKEAIAAKNKAKELSEWKLEESRKFEEARSAEEAALAAAEMEKAKCKAALEAAEIAQKMAEKEAQRRKQAEMMARREAEEKNRALSALSKNEFRYRKYTIEEIKVATDKFSESMKIGEGGYGPVFKGKLDHTAVAIKLLRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEYMNNGSLDDRLFRRGNSPPLSWRRRFKIASEVATALLFLHQTKPEPLVHRDLKPGNILLDRNFVTKISDVGLARLVPPSVADQVTQYHMTSAAGTFCYIDPEYQQTGKLTTKSDIYSFGILLLQIITARPPMGLAHHVKKAIEKGRLADVLDPAVPDWPIEETLAFANLALNCAELRKKDRPELGSVIVPELKRLKDFGKNFAPDVSQAQSSSNPPTE
Length710
PositionTail
OrganismParasponia andersonii (Sponia andersonii)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Parasponia.
Aromaticity0.06
Grand average of hydropathy-0.428
Instability index47.61
Isoelectric point8.97
Molecular weight78499.74
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19340
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     112.53|      28|      28|     293|     320|       2
---------------------------------------------------------------------------
  293-  320 (46.63/30.03)	EMKRLKLELKQTMDMYSSACKEAIAAKN
  324-  349 (34.38/20.32)	ELSEWKLEESRKFEEARSAEEAALAA..
  374-  393 (31.52/18.05)	EAQR.....RKQAEMM..ARREA.EEKN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.46|      27|      49|     476|     504|       3
---------------------------------------------------------------------------
  476-  504 (45.26/49.72)	MVLLLGACPEYgcLVYEYMNNGS.LDDRLF
  528-  555 (45.20/38.82)	LLFLHQTKPEP..LVHRDLKPGNiLLDRNF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19340 with Med32 domain of Kingdom Viridiplantae
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