<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19307

Description Uncharacterized protein
SequenceMEWGEYERRVAETVKWCQERNESPLVWAMEVGKWAEQAPSPELGQVLVSLLCFRNNTPSLWKFLQQAMSSGLLFPLQLLSLLSASVIPHRHSQPEAYTLYLQLLSRYALSFNPALPDVNKEKIIKSVDNTLRLSQTYDVRILEIGHVFVLFFFRIITSLIDGVLDDWGLQKTSSDKPSLAFGSTDSKDMDVDARESHGWVRKEHREEMRTMNSFLAMEVLGKLTESRKALLLLRLVHFNMPERFNDLLCSLQLFKGHQLASLDLKPAMQLLARFSANIQRVMDFEHRLDKRQLIGMLVDKGSCKPVPHCNFDSDFSACWVPFDIYMENVMDGKQLLVKSAIDVIAEVVKTLQVLNQATWQETFLALWLSALRLVQRERNPLEGPLPHLEARLCILLSVVPLAIAKVLDDESETKVYSSSALGSTVSADETNKKAPAPRKHGLISSLQVLGQFSGILCPPASVVNAANIAATKAARFVHHSKNEKDGVGYGSYGQALIKAGGNMRHLIVEACITRNLIDASAYFWPYYVSASAMAPSDTSPVQKSPWSTFMEGAPLSGSLINSLVATPASSLAEIEKLYHIALNGSEEEKSAAAKILCGASLRIGWNIQDLM
Length611
PositionTail
OrganismParasponia andersonii (Sponia andersonii)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Parasponia.
Aromaticity0.08
Grand average of hydropathy-0.031
Instability index43.00
Isoelectric point6.59
Molecular weight68087.84
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19307
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     244.89|      79|     117|     192|     274|       1
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  192-  274 (120.26/88.58)	DARESHGWVRKE.HREEMRTMNSFLAMEVLGKLTESRKALLLLRLVHFNmpERFNDL.LCSLQLFKGHQlASLDlKPAMQLLARF
  312-  392 (124.63/77.02)	DSDFSACWVPFDiYMENVMDGKQLLVKSAIDVIAEVVKTLQVLNQATWQ..ETFLALwLSALRLVQRER.NPLE.GPLPHLEARL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.55|      18|      19|      36|      53|       2
---------------------------------------------------------------------------
   36-   53 (32.15/19.05)	EQAPS..PELGQVLVSLLCF
   55-   74 (27.39/15.24)	NNTPSlwKFLQQAMSSGLLF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.86|      19|      19|     533|     551|       4
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  533-  551 (34.65/18.47)	MAPSDTSPVQKSPWSTFME
  555-  573 (27.21/13.20)	LSGSLINSLVATPASSLAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.23|      13|      24|      76|      88|       5
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   76-   88 (21.55/13.57)	LQLLSLLSASVIP
  101-  113 (23.68/15.64)	LQLLSRYALSFNP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19307 with Med33 domain of Kingdom Viridiplantae
Unable to open file!