<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19298

Description "Phosphorylase kinase, gamma catalytic subunit"
SequenceMARGGGAEKKEEVVVVAIDKDKSSQYALKWTVDHLITRGQTITLLHIKNKTSSIPNPCKILSFMLVQTVVVYENGILSVFDMTLWCGAVGSFISVNEVCEDVARTYKQQMESQAKDLFLPFRCFCTRKDIKCSEVILEEGDISKAIMNYVAVNSIETLVLGAASRNSLVKRFKPTDVPSTVSKGAPEFCTVYVIAKGKISSVRSASASTPTRASTRNQTHNHMQQQHRASDRAHHVPHNPYPPQDELEMRSPFTRGKHSMNKSYELSHDSDISYVSSGRPSMDHLFPSLYDSNESGMSPRMSASSDFDMLKNFASSLSSGHRSIDLSSSHYDFSHNSHDSGKSSSSQNSHMDEVEAEMKRLRLELKQTMDMYSTACKEALSANKKAIELHRWKMEEEQKLEEARLAEEAALALAEKEKAKCKAAIEAAEAAQRLAELEAQKRIHAEMRAQKEAEERKKALGGFAQGEIRYRKYTIEEIETATQDFAESRKIGEGGYGPVYRGELDHTPVAIKILRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLEDRLFRRGNTPVLSWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTATAGTFCYIDPEYQQTGMLGIKSDIYSLGVLFLQMITAKPPMGLTHHMERAIERGTFEEMLDPAVTDWPVEEALNFVKLALQCSEMRRKDRPDLGKIVLPELNRLRELAEDNMFGNGASYDLAGLASKQGSVSTSSQVVISDPQLQHSESDSPRSRSSTSSSTERI
Length812
PositionTail
OrganismParasponia andersonii (Sponia andersonii)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Parasponia.
Aromaticity0.07
Grand average of hydropathy-0.440
Instability index50.07
Isoelectric point6.52
Molecular weight90629.88
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19298
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.58|      18|      19|     446|     464|       1
---------------------------------------------------------------------------
  446-  463 (32.50/25.00)	EMRAQKEAEERKKALGGF
  479-  496 (30.08/16.91)	ETATQDFAESRKIGEGGY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.91|      24|      28|     357|     384|       2
---------------------------------------------------------------------------
  357-  380 (40.52/27.27)	EMKRLRLELKQTMDMYSTACKEAL
  388-  411 (39.39/17.73)	ELHRWKMEEEQKLEEARLAEEAAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.81|      10|      20|     251|     260|       3
---------------------------------------------------------------------------
  251-  260 (19.88/10.12)	SPFTRGKHSM
  273-  282 (18.93/ 9.32)	SYVSSGRPSM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.65|      15|      19|     212|     226|       7
---------------------------------------------------------------------------
  212-  226 (29.04/15.57)	RASTRNQ..THNHMQQQ
  228-  244 (26.60/13.76)	RASDRAHhvPHNPYPPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      88.42|      17|      19|     316|     332|       8
---------------------------------------------------------------------------
  292-  308 (29.86/15.86)	SNESGMSPRMSASSDFD
  316-  332 (29.47/15.56)	SLSSGHRSIDLSSSHYD
  337-  352 (29.09/15.28)	SHDSG.KSSSSQNSHMD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19298 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DLSSSHYDFSHNSHDSGKSSSSQNSHMDEVEAEMKR
2) RSASASTPTRASTRNQTHNHMQQQHRASDRAHHVPHNPYPPQDELEMRSPFTRGKHSMNKSYELSHDSDISYVSSG
3) STSSQVVISDPQLQHSESDSPRSRSSTSSSTERI
325
203
779
360
278
812










Molecular Recognition Features






MoRF SequenceStartStop




NANANA