<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19292

Description Heat shock protein 70 family
SequenceMRMLSFSLLFLTQFLVGLEAADDSSAKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAPLNPERTIFDVKRLIGRKFDDPEVQRDIKFLPYKVVNKEGKPYIKVKVKGETKVFSSEEISAMVLGKMKETAEQYLGKKIKDAVITVPAYFNDAQRQATKDAGTIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNRALGKLRKECERAKRALSNQHQVRVEIESLFDGIDFSEPLTRARFEELNMDLFKKTMGPVKKAMEDAGLKKTDIHEIVLVGGSTRIPKVQQLLKDFFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGEETKGMLLLDVTPLSLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIEVTFEVDANGILHVKAEDKAAKNSKSITITDVKGSLSQEEIERMVKEAEEFAEEDKKLREKIDARNKLETYVYNMKNTINDKDKLADKIDSDDKEKIESTLKETHEWLDDNQNAEKEDYDEKLKEVEAVCNPVIKQVYEKSSGSTSGSEDEESNAEL
Length655
PositionUnknown
OrganismParasponia andersonii (Sponia andersonii)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Cannabaceae> Parasponia.
Aromaticity0.06
Grand average of hydropathy-0.484
Instability index27.43
Isoelectric point5.30
Molecular weight72675.67
Publications









Function






Annotated function


GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19292
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.14|      25|      27|     555|     579|       1
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  555-  579 (42.16/32.36)	KLREKIDA..RNKLETYVYNMKNTIND
  582-  608 (36.98/27.41)	KLADKIDSddKEKIESTLKETHEWLDD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.67|      18|      21|      73|      93|       2
---------------------------------------------------------------------------
   73-   93 (23.66/23.44)	ERLIGEaaKNQAPlNPERTI.F
   96-  114 (27.01/15.07)	KRLIGR..KFDDP.EVQRDIkF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     274.15|      68|     193|     149|     223|       4
---------------------------------------------------------------------------
  149-  216 (109.54/61.85)	LGKMKETAEQYLGKK..I.KDAVI................TVPAYFNDAQRQATKDAGTIAGLNVARIINEPTAA...AIAYG.......LDKKGGE
  338-  410 (90.56/49.13)	MGPVKKAMEDAGLKKtdI.HEIVL................VGGSTRIPKVQQLLKD..FFDGKEPNKGVN.PD.E...AVAYGaavqggiLSGEGGE
  425-  508 (74.05/46.71)	LG..IETVGGVMTKL..IpRNTVIptkksqvfttyqdqqtTVSIKVYEGERSLTKDCRELGRFDLSGIPPAPRGVpqiEVTFE.......VDANG..
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19292 with Med37 domain of Kingdom Viridiplantae
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