<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19232

Description Uncharacterized protein
SequenceMVSNDIRSLTRSGNSSPRSSLHRCNSLMLPNKGRRPATRNRRHSCLRGRTNGSNGRLPHLTASRVGGFGEWPVQLAQGAFPAERRAGQQSAWLGALQPVQLADGGWEQEPSGTLKELSPMGKTSSNYTPISSATHGIGINSRQSINGEPGGAAIPSQPLKCLDVRHSTNRNGKTGSGQKLLEMLVSRKIECSRATWYIRVIGLNEIF
Length207
PositionKinase
OrganismPuccinia coronata var. avenae f. sp. avenae
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina> Pucciniomycetes> Pucciniales> Pucciniaceae> Puccinia.
Aromaticity0.04
Grand average of hydropathy-0.621
Instability index60.83
Isoelectric point11.15
Molecular weight22423.10
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP19232
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.80|      20|      20|      22|      41|       1
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   22-   41 (38.40/18.78)	HRC.NSLMLPNKGRRPA.TRNR
   43-   64 (29.40/13.06)	HSClRGRTNGSNGRLPHlTASR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.13|      13|      23|      71|      93|       2
---------------------------------------------------------------------------
   71-   83 (27.24/26.28)	W.....PVQLAQGAFPAE
   92-  109 (22.89/ 6.81)	WlgalqPVQLADGGWEQE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.80|      17|      44|     110|     126|       3
---------------------------------------------------------------------------
  110-  126 (30.38/20.84)	PSGTLKELSPMGKTSSN
  155-  171 (32.41/22.68)	PSQPLKCLDVRHSTNRN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP19232 with Med12 domain of Kingdom Fungi
Unable to open file!