Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAGGPHVVRFADSHARLSVGGGPGLDRVEVRQRGRGAYNQLLLLPTTFCFDFAGRWRTEHTDAHPRKDAQHGMMTSLEKSKQEQYMANKQEHMANTQQYSYRSASQKTPSGFVNTSPASSSSSSSAHQPTKKIHAECSTQRLTPFDQETINQIDRVELQRDWGPHLVPLQFVIQRTIAQVFCEMQTLTQGCANAEDYDRKKHIIDFVVHARRQFIKLLVLVKWSTHSGSVHKIMSIVGFLQRQNNQFKRNVNILKASKENFHSARMRNYDLPTALQVLTNGYPTLPGRLIDQFDSKPKLSDSQVIKIMQDLNELIRYRLASREIIPKDFRSYQIYDGRVAFRIDRMFECSLTLGGGELDSQWYLLHVEFLFKVTGPRGNDFMCIPQGPIKDQIIECGNRVMAPSTLSPESDPDPKPPERPIMKVFAYLRDLCLNYQLEALHYQASQLGRSAWATHTRLLISTDRKNLTIMYWLNARPVSIPVTRPGQQPPKNLPQPTPQGTLTIRRQIERHSPSRTRVLGFLSGYPLKDKILSNEQDDDFGASSTERLQVVWRPIEVTTRAGSLEQEALKDLQIRQGDEVVFTKTEVGLVELELTINDLCLESIIQRAVRVHTDSTLRRAFSDLTRLERPAGGPSTYAVPYFASVRLIACENINSSERFAKSIEVVLHARHAVEVSIDQFSGRFRLQSIAHPSRTQKDDNESAHSLGVGCFSGYNPLRLSQSANKININPSGLRDVLVRLKSDILLDQIEFKARLLGIRTTRNLPIQLQHLSLPSYLSSPSTIPQHIFQLTLYCRLSNFPHHYLLIMVTENGIRCALIIVNQNRDDQPPLHLGGTTCWNVDLVSAVAVPTFADDLDEDGGVLDQFTLSRTQLEYVYHFCLVQATLNQLKAPLRKSEISYEQFLPMTAEIIKKQYQNYRSHRSTLPSNPSSPSIKLPVLHLSYEVMGLLLIPLPGLLKPSLLYDHHSHRGVFRENLAVQVFPHPGSHFGVRLEVRLNFNPEKLRPEELEKIFKSKEENLNSKIISSYLSRPSKSKPSASSFLLPSLRYLKQPRKNDDDDDDDDDDDEDEEPLSRRIQTTLLKPASPLANTTEEHEKKETEDDPDAELIGPGEWSIDAQSHQFVMRFQNFTEQVDQIYKLSLQKFFNLIQSSASSDP |
Length | 1155 |
Position | Tail |
Organism | Puccinia coronata var. avenae f. sp. avenae |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina> Pucciniomycetes> Pucciniales> Pucciniaceae> Puccinia. |
Aromaticity | 0.08 |
Grand average of hydropathy | -0.472 |
Instability index | 46.79 |
Isoelectric point | 8.31 |
Molecular weight | 131374.71 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP19225 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 370.16| 123| 165| 55| 215| 1 --------------------------------------------------------------------------- 55- 197 (181.59/152.51) RWRTEHTDAH.........PRKDAQHGMMTSLEKSKQEQYmankqeHMANTQQYSYRSASQKTPSGFvNTSPASSSSSSSAhQPtkKIhaecSTQRLTPFDQEtINQIDRVEL.QRDWGPH.LVPLQ.......FVIQRtiaqVF.CEMqTLTQGCANAEDY 222- 363 (188.57/132.02) KWSTHSGSVHkimsivgflQRQNNQFKRNVNILKASKENF......HSARMRNYDLPTALQVLTNGY.PTLPGRLIDQFDS.KP..KL....SDSQVIKIMQD.LNELIRYRLaSREIIPKdFRSYQiydgrvaFRIDR....MFeCSL.TLGGGELDSQWY --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 199.98| 68| 268| 706| 780| 2 --------------------------------------------------------------------------- 706- 780 (99.29/84.36) LGVGCF...SGYNPLRLsqsANKININPSGLR....DVLVRLKSDILLDQIeFKARLlgIRTTRNLPIQLQHLsLPS..YLSSP 975- 1051 (100.69/63.42) LAVQVFphpGSHFGVRL...EVRLNFNPEKLRpeelEKIFKSKEENLNSKI.ISSYL..SRPSKSKPSASSFL.LPSlrYLKQP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 102.77| 31| 165| 428| 458| 3 --------------------------------------------------------------------------- 428- 458 (55.34/34.62) LRDLCLNYQLE.ALHYQASQLGRSAWATHTRL 596- 627 (47.43/28.67) INDLCLESIIQrAVRVHTDSTLRRAFSDLTRL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 110.83| 30| 269| 822| 851| 5 --------------------------------------------------------------------------- 822- 851 (55.70/32.14) QNRDDQPPLHLGGTTCWNVDLVSAVAVPTF 1096- 1125 (55.12/31.74) KETEDDPDAELIGPGEWSIDAQSHQFVMRF --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 62.50| 17| 213| 853| 869| 10 --------------------------------------------------------------------------- 853- 869 (30.63/18.18) DDLDEDGGVLDQFTLSR 1057- 1073 (31.87/19.21) DDDDDDDDDEDEEPLSR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) PLSRRIQ 2) SFLLPSLRYLKQPRKN | 1070 1039 | 1076 1054 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab