<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19188
Description |
Mediator of RNA polymerase II transcription subunit 13 |
Sequence | MGSHAGKSELGGGEMHVRCAFASAHISSRVRQVEYCVLRPAEKPGGPDLLAGAARALQAAQMQLHAGLEGENAPCNALKLLEQTWLYAIESTPTFPSAPASLWVFGAHDPLDHAGLRETERGTLTAPQDGLEHSTAQHAYFLRAIENAIADMRTADPHAERGVRCGAGVLLVESTPLRLLEFHAHTTLDTLVVRMDAHSVPWMPLAMQYDPDRPCSAPPVRPGESQLVLLPTLVHATYLDVFPGAISQNTRLADALAPVFAQRAAHDTMRVMVRIPVQHPPAMPMDTMDMGLDTATGTLAVTLLWPAALCLCLPAPPAPKEREPLGALCTLSVAALLRAMHRAPSAPLEAAESVVRSHSPRDEEEDVFQGIGQLTEDDFRFFGEPVDAAAAPPPVQAHAPAASHASPLGSPHETPIFAAPTPRASKYDVHGKLYTPLLSRKRRASGELALERRVVPRISPYMPADTPQVPVHSPLLDASESGSGSEKSEKSDAPALPFVSRAVALVRLQCSTWVAHQGALQARPCSGTRLEWAAHGAPRPIERDQCAPAAWGPLESVCVAVANPVPRFLLGCQRAVVQVCPTALDAWATLGLEPVGGPKRICVCAVLLGDMDPLAVRQWLTGLEHAYVRLRMGTLCASSAVLAWQDGQLVNTANGTPTVLANAWGAKHAADTRAICLLHAPDTASLDAAEHLYKQYRAAPSVHAAHAVLALPRDFVQPAWRQDFRAQARIARVIYDAVPRAGRAIAHTLALAPGYYAACKYLRAECAMQLAWPPPLQNVLQHGAVLHVAYDVVPQDACSMVRVVGIDDRAQCTFVQTWASQGTRADVRRIWEMVRAQMRTAPQVAWNSVVCRFGAMPMAESEAWAVLGTERKRDAALLDTLIACVERGAPLHMPAQEKNTLAAPLHAVFPTERMVLGAKGEQLLALQTAYVAQESTGAWTVHLLHAFFTAQERALDGYMHDLVLHLGALQYLATARWPLEAPLLPWHVAVLAAA |
Length | 994 |
Position | Kinase |
Organism | Malassezia vespertilionis |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina>
Malasseziomycetes> Malasseziales> Malasseziaceae> Malassezia.
|
Aromaticity | 0.06 |
Grand average of hydropathy | 0.005 |
Instability index | 44.05 |
Isoelectric point | 6.48 |
Molecular weight | 107104.93 |
Publications | |
Function
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 RuleBase:RU364134
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP19188
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 111.37| 29| 44| 408| 450| 1
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337- 376 (40.07/13.22) LRAMHRAP..SAPleaaesvvrshSPRDEEEDVFQGI............GQLTE
382- 404 (31.47/ 6.57) FGEPVDAA..AAP...........PPVQAHAPAASH..................
408- 450 (39.83/31.41) LGSPHETPifAAP...........TPRASKYDVHGKLytpllsrkrrasGELAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 90.89| 27| 45| 816| 842| 3
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816- 842 (49.67/34.61) QTWASQGT..RADVRRIWEMVRAQMRTAP
862- 890 (41.22/27.29) EAWAVLGTerKRDAALLDTLIACVERGAP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 222.25| 53| 53| 688| 740| 6
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624- 689 (59.24/24.96) EHAYVRLRMG.TLCASSAVLAWQDgQLVNtangtPtvlanAWG...AKHAADTRAICLLHapDtASLDAA
690- 742 (91.84/42.51) EHLYKQYRAAPSVHAAHAVLALPR.DFVQ.....P.....AWR...QDFRAQARIARVIY..D.AVPRAG
743- 795 (71.17/31.38) RAIAHTLALAPGYYAACKYLR.AE.CAMQ.....L.....AWPpplQNVLQHGAVLHVAY..D.VVPQ..
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.24| 25| 48| 165| 189| 7
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165- 189 (44.16/27.24) CGAGVLLVESTPLRLLEFHAHTT.LD
215- 240 (40.08/23.96) CSAPPVRPGESQLVLLPTLVHATyLD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 113.14| 24| 53| 895| 918| 8
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895- 918 (42.06/19.41) AQEKNTLAAPLHAVFPTERMVLGA
950- 968 (32.94/13.71) AQER.ALDGYMHDLV....LHLGA
973- 993 (38.14/16.96) ATARWPLEAPL...LPWHVAVLAA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 99.72| 29| 33| 563| 592| 10
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563- 592 (50.12/29.03) NPV..PRFLLGCQRAVVQVCPTALDAWATlGL
593- 623 (49.61/24.92) EPVggPKRICVCAVLLGDMDPLAVRQWLT.GL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.07| 18| 35| 280| 301| 11
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280- 301 (26.06/24.98) PPAmPMDTMDMGldtATGTLAV
316- 333 (35.01/18.84) PPA.PKEREPLG...ALCTLSV
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