<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP19112
Description |
Mediator of RNA polymerase II transcription subunit 15 |
Sequence | MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKEMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGGLSAMGQPMSLSGQPPPGTSGMAPHNMAVVSTATPQTQQFQQQAALQQQQQQQQFQAQQSAMQQQFQAVVQQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRMAQLQLQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHPQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPQVQPQVQQQTAVQTAQTAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRLEDDERQSIPSVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQACLSAA |
Length | 725 |
Position | Tail |
Organism | Saimiri boliviensis boliviensis (Bolivian squirrel monkey) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Platyrrhini> Cebidae>
Saimiriinae> Saimiri.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.712 |
Instability index | 86.97 |
Isoelectric point | 9.38 |
Molecular weight | 79849.76 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364148
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP19112
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 76.16| 18| 20| 278| 296| 1
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250- 267 (35.12/ 7.46) QPPMQQPQPPPSQALPQQ
278- 295 (41.03/ 7.86) QPPPQPQQPPVAQNQPSQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 187.44| 37| 38| 177| 213| 3
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177- 203 (44.00/ 8.10) ................................QQQFQ....AVVQQQQQQLQQQQQQQQHL.....IK
204- 249 (54.06/11.91) LHHQNQ.QQIQ.....................QQQQQlqrmAQLQLQQQQQQQQQQQQQALqaqppIQ
271- 324 (42.95/ 7.70) MHHPQH.H...qpppqpqqppvaqnqpsqlppQSQTQ....PLVSQ.AQALPGQMLYTQPP.....LK
370- 402 (46.44/ 9.02) LSSPSPgQQVQ.....................TPQSM....P..PPPQPSPQPGQPGSQP........
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 70.65| 18| 19| 99| 116| 4
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99- 116 (36.18/16.33) IGMPPRGPGQSLGGMGGL
119- 136 (34.47/15.18) MGQPMSLSGQPPPGTSGM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 60.66| 17| 28| 410| 437| 5
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410- 429 (31.38/12.45) PAPSPssfLPSP.SPQPSQSP
441- 458 (29.28/ 6.98) PSPGP...LNTPvNPSSVMSP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 74.40| 23| 28| 500| 526| 6
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491- 518 (35.23/18.91) DKNEdrkkdLSKMKSLLDILTDPSKRCP
523- 547 (39.17/14.18) QKCE...iaLEKLKNDMAVPTPPPPPVP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.43| 17| 262| 325| 341| 10
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325- 341 (30.80/12.74) FVRAPMVVQQPQ.VQPQV
343- 360 (23.63/ 7.95) QQTAVQTAQTAQmVAPGV
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