<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18988
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MCDLRRPAAGGMMDLAYVCEWEKWSKSTHCPSVPLACAWSCRNLIAFTMDLRSDDQDLTRMIHILDTEHPWDLHSIPSEHREAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESSVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNNIFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHVVHRLSLQTMAVFYSSAAPRPVDEPAIKRPRTAGPAVHFKAMQLSWTSLALVGIDNQGKLSVLRLSPSMGHPLEVGLALRHLLFLLEYCMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQTAALQQVLSTRILAMKASLCKLSPCTVTRVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSLLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICSCSVWVLLGWQLLPGRDEGPASEPDEALVDECCLLPSQLLIPSLDWLPASDGLVSRLQPKQPLRLQFGRVPTLPGSAATLQLDGLARAPGQPKIDHLRRLHLGACPTEECKACTRCGCVTMLKSPNRTTAVKQWEQRWIKNCLCGGLWWRVPLSYP |
Length | 855 |
Position | Tail |
Organism | Rhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini>
Cercopithecidae> Colobinae> Rhinopithecus.
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Aromaticity | 0.07 |
Grand average of hydropathy | 0.068 |
Instability index | 48.83 |
Isoelectric point | 7.87 |
Molecular weight | 94602.05 |
Publications | PubMed=25362486
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP18988
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 861.40| 299| 369| 122| 489| 1
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122- 489 (414.62/382.28) VGSLVEgdpivalsWLHNG...VKLALHvEKSGASSFGEKFSRVKFSPS....LTLFGGKpmegWIAVTVSGLVTvSLLKPsgQVL.....TSTESLCRLRGRVALADIaftgggnivvatadgssaspvqfYKVCVSVVSEKCRIDTEILPSL..FMRCTTD..LNRKDKFPAITHL.....KFLaRDMSEQVLLcasSQTSSIVECWSLRKEG.LPVNNIFQQISP.............VVGDKQPTILKWRILSATN.......DLDRVSAVALpkLPISL..TNTDLKVASD...TQFYPGLGLALAFhdGSVhvvhrlslqtmAVFYSSAAPRPVDEPAikRprTAG.PAV.HFKAMQLSWTSLALVGIDNQ.GKLSVLRlSPSMGHPLEvGLALRhllfLLEYCMVTGYdWW
500- 848 (446.77/264.28) VQSLVE........KLHEEytrQTAALQ.QVLSTRILAMKASLCKLSPCtvtrVCDYHTK....LFLIAISSTLK.SLLRP..HFLntpdkSPGDRLTEICAKITDVDI.......................DKVMINLKTEEFVLDMNTLQALqqLLQWVGDfvLYLLASLPNQGSLlrpghSFL.RDGTSLGML...RELMVVIRIWGLLKPScLPVYTATSDTQDsmsllfrlltklwICSCSVWVLLGWQLLPGRDegpasepDEALVDECCL..LPSQLliPSLDWLPASDglvSRLQPKQPLRLQF..GRV...........PTLPGSAATLQLDGLA..R..APGqPKIdHLRRLHLGACPTEECKACTRcGCVTMLK.SPNRTTAVK.QWEQR....WIKNCLCGGL.WW
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