<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18985
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MCDLRRPAAGGMMDLAYVCEWEKWSKSTHCPSVPLACAWSCRNLIAFTMDLRSDDQDLTRMIHILDTEHPWDLHSIPSEHREAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESSVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNNIFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHVVHRLSLQTMAVFYSSAAPRPVDEPAIKRPRTAGPAVHFKAMQLSWTSLALVGIDNQGKLSVLRLSPSMGHPLEVGLALRHLLFLLEYCMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQTAALQQVLSTRILAMKASLCKLSPCTVTRVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSLLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPASEPDEALVDECCLLPSQLLIPSLDWLPASDGLVSRLQPKQPLRLQFGRVPTLPGSAATLQLDGLARAPGQPKIDHLRRLHLGACPTEECKACTRCGCVTMLKSPNRTTAVKQWEQRWIKNCLCGGLWWRVPLSYP |
Length | 841 |
Position | Tail |
Organism | Rhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini>
Cercopithecidae> Colobinae> Rhinopithecus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.052 |
Instability index | 48.82 |
Isoelectric point | 7.87 |
Molecular weight | 93065.24 |
Publications | PubMed=25362486
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP18985
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 102.24| 27| 132| 22| 48| 1
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22- 48 (53.17/25.01) EKWSKSTHCPSVPLACAWSCRNLIAFT
157- 183 (49.06/22.61) EKFSRVKFSPSLTLFGGKPMEGWIAVT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.29| 12| 27| 89| 100| 3
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89- 100 (21.77/13.58) WDQSGSRLLSAD
118- 129 (21.52/13.34) WESSVGSLVEGD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 189.04| 61| 189| 279| 352| 4
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279- 352 (89.61/89.86) AITHLKFL.......ARDMSEQVLLCASSQTSSIVEcwSLRKEGLPVNNIFQQIspvvgdkqptiLKWRILSATNDLDRVS
470- 537 (99.43/66.48) ALRHLLFLleycmvtGYDWWDILLHVQPSMVQSLVE..KLHEEYTRQTAALQQV...........LSTRILAMKASLCKLS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 119.23| 28| 32| 736| 764| 5
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711- 734 (24.28/ 6.28) EALVDEccLLPSQL.....LIPSLDWLPA......
736- 763 (50.60/24.71) DGLVSR..LQPKQP.....LRLQFGRVPTLPGSAA
768- 798 (44.36/21.20) DGL.AR...APGQPkidhlRRLHLGACPTEECKAC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 66.14| 20| 189| 443| 462| 6
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443- 462 (36.13/22.65) LVGIDNQGKL.....SVLRLSPSMG
629- 653 (30.01/17.56) LASLPNQGSLlrpghSFLRDGTSLG
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