<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18971

Description Uncharacterized protein
SequenceMVSPRQAPYRSRAKGPLGGHGRPARPLAVRRSWPDSPRSPQPLQLRACSAPPMKGARVFGALGPIGPSSPGLTLGGLTVSEHRLSNKLLAWSGVLKRRLYYDSTVKLKRALLCQAYLKLIMQLIPQQLMATLRSLFLAQFHFTNRDCSLLNRLCRIMSKGFAGCMPFPHISPYEMCVLMFPNSFRTKIFMGFIPYDQSGFVSAIRQVITTRKQAVGSGDRQQEVLAWTGVMEWQEPRPETNSRSKRWLPSHVYQWPRKMYMQLIPQQLLTTLMLLFLCRIMDNVRFSYKAWCEIRVLMLLYSSEKKIFIGLIPQGNFLNGILQIIVLQWNLEQEQQQQQQGIGG
Length344
PositionUnknown
OrganismRhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini> Cercopithecidae> Colobinae> Rhinopithecus.
Aromaticity0.10
Grand average of hydropathy-0.142
Instability index63.43
Isoelectric point10.45
Molecular weight39296.95
Publications
PubMed=25362486

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP18971
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     193.56|      55|     116|     167|     223|       1
---------------------------------------------------------------------------
  167-  223 (95.15/58.97)	FPHISPYEMCVLMFPNSFRTKIFMGFIPydQSGFVSAIRQVITTRKQAVGSGDRQQE
  286-  340 (98.41/55.14)	FSYKAWCEIRVLMLLYSSEKKIFIGLIP..QGNFLNGILQIIVLQWNLEQEQQQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     179.84|      51|     138|      89|     139|       2
---------------------------------------------------------------------------
   89-  139 (90.83/56.73)	LAWSGVLK.RRLYYDSTVKLKRALLCQAYL...KLIMQLIPQQLMATLRSLFLAQ
  225-  279 (89.01/55.46)	LAWTGVMEwQEPRPETNSRSKRWLPSHVYQwprKMYMQLIPQQLLTTLMLLFLCR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP18971 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MVSPRQAPYRSRAKGPLGGHGRPARPLAVRRSWPDS
1
36










Molecular Recognition Features






MoRF SequenceStartStop




1) QAPYRSRAKGPLGGHGRP
6
23