<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18799

Description Uncharacterized protein
SequenceMKVVNLKQAILQAWKERWSDYQWAINMKKFFPKGATWDILNLADALLEQAMIGPSPNPLILSYLKYAISSQFDDFSRDLCIQALLDIMDMFCDRLSCHGKAEECIGLCRALLSALHWLLRCTAASAERLREGLEAGAPAAGEKQLAMCLQRLEKTLSSTKNRALLHIAKLEEASSWTAMEHSLLKLGEILANLSDPQLRSQAEHCGSLIRSIPTMLSVHSEQLHKTGFPTVHALVLLEGTMNLTGETQPLVEQLMMVKRMQHIPTPLFVLEIWKACFVGIIESPEGTEELKWTAFTFLKIPQVLVKLKKYSHGDRDFTEDVNCAFEFLLKLTPLLDKADQHCNCDCANFLLQECSKQGLLSEASVNNLMAKRALDREHAPQLKSGENANIQPNPGLILRAEPTVTNILKTMDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFINLNEFTTHGSEDNPKAASVRALLFDISFLMLCYVAQTYGSEVILSESRTGAEVPFFETWMQTCMPEEGKILNPDHPCFRPDSTKVESLVALLNNSSEMKLVQMKWHEACLSISAAILEILNAWENGVLAFESIQKITDNIKGKVCSLAVCAVAWLVAHVRMLGLDEREKSLQMIRQLAGPLCSENTLQFYNERVVIMSSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLLPPKRPIKEVLTDIFAKVLEKGWVDSRSIHIFDTLLHMGGVYWFCNNLIKELLKETRKEHTLRAVELLYSIFCLDMPQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSYSSHKGQASTRQKKRHREDIEDYISLFPLDDTQPSKLMRLLSSNEDDTNVLSSPTDRSMSSSLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVDCLEQGSRGSILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPQGRQVAAKAIAAL
Length976
PositionTail
OrganismPropithecus coquereli (Coquerel's sifaka) (Propithecus verreauxi coquereli)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Eutheria> Euarchontoglires> Primates> Strepsirrhini> Lemuriformes> Indriidae> Propithecus.
Aromaticity0.07
Grand average of hydropathy0.001
Instability index44.99
Isoelectric point6.24
Molecular weight108803.28
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP18799
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     115.96|      37|     563|     315|     369|       1
---------------------------------------------------------------------------
   74-  113 (60.70/30.92)	DFSRDL.C.......IQALLDIMDMFCDrLSCHG.KAEECIGlcRALLS
  316-  361 (55.27/62.85)	DFTEDVnCafefllkLTPLLDKADQHCN.CDCANfLLQECSK..QGLLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     174.11|      59|     194|     180|     250|       2
---------------------------------------------------------------------------
  180-  250 (79.27/74.22)	EHS.LLKLGEIlANL.SDPQLRSQAEhcGSLIRSIPTMLSVHSEQlhKTGFPTVHalvlleGTMnLTGETQPL
  377-  437 (94.84/53.95)	EHApQLKSGEN.ANIqPNPGLILRAE..PTVTNILKTMDADHSKS..PEGLLGVL......GHM.LSGKSLDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     164.74|      50|     194|     565|     614|       4
---------------------------------------------------------------------------
  565-  614 (84.95/60.10)	CLSISAAILEILNAWENGVLAFES.IQKITDNIKGKVCSLAV.CAVAWLVAH
  760-  811 (79.79/55.96)	CLDMPQVTLVLLGHILPGLLTDSSkWHSLMDPPGTALAKLAVwCALSSYSSH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.12|      18|     241|     266|     285|       5
---------------------------------------------------------------------------
  266-  285 (31.21/24.26)	PLFvlEIW.KACF..VGIIESPE
  510-  530 (28.91/16.18)	PFF..ETWmQTCMpeEGKILNPD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP18799 with Med24 domain of Kingdom Metazoa
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