<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18798

Description Uncharacterized protein
SequenceMKVVNLKQAILQAWKERWSDYQWAINMKKFFPKGATWDILNLADALLEQAMIGPSPNPLILSYLKYAISSQVKPSPLFFPQFDDFSRDLCIQALLDIMDMFCDRLSCHGKAEECIGLCRALLSALHWLLRCTAASAERLREGLEAGAPAAGEKQLAMCLQRLEKTLSSTKNRALLHIAKLEEASLHTSQGLGQGGTRANQPTASWTAMEHSLLKLGEILANLSDPQLRSQAEHCGSLIRSIPTMLSVHSEQLHKTGFPTVHALVLLEGTMNLTGETQPLVEQLMMVKRMQHIPTPLFVLEIWKACFVGIIESPEGTEELKWTAFTFLKIPQVLVKLKKYSHGDRDFTEDVNCAFEFLLKLTPLLDKADQHCNCDCANFLLQECSKQGLLSEASVNNLMAKRALDREHAPQLKSGENANIQPNPGLILRAEPTVTNILKTMDADHSKSPEGLLGVLGHMLSGKTKAASVRALLFDISFLMLCYVAQTYGSEVILSESRTGAEVPFFETWMQTCMPEEGKILNPDHPCFRPDSTKVESLVALLNNSSEMKLVQMKWHEACLSISAAILEILNAWENGVLAFESIQKITDNIKGKVCSLAVCAVAWLVAHVRMLGLDEREKSLQMIRQLAGPLCSENTLQFYNERVVIMSSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLLPPKRPIKEVLTDIFAKVLEKGWVDSRSIHIFDTLLHMGGVYWFCNNLIKELLKETRKEHTLRAVELLYSIFCLDMPQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSYSSHKGQASTRQKKRHREDIEDYISLFPLDDTQPSKLMRLLSSNEDDTNVLSSPTDRSMSSSLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVDCLEQGSRGSILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPQGRQVAAKAIAAL
Length969
PositionTail
OrganismPropithecus coquereli (Coquerel's sifaka) (Propithecus verreauxi coquereli)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Eutheria> Euarchontoglires> Primates> Strepsirrhini> Lemuriformes> Indriidae> Propithecus.
Aromaticity0.07
Grand average of hydropathy-0.012
Instability index46.28
Isoelectric point6.36
Molecular weight107977.34
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP18798
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     302.99|      80|     194|     180|     277|       1
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  180-  263 (126.48/85.37)	L....EEASLHTSQGLGQGGTRANQP.TASWTAMEHS.LLKLGEILANL.SDPQLRSQAEHCGSLIRSIPTMLSVHSEQlhKTGFPTVhaL
  380-  455 (107.26/59.80)	L....QECS...KQGLLSEASVNNLM.AKRALDREHApQLKSGEN.ANIqPNPGLILRAE..PTVTNILKTMDADHSKS..PEGLLGV..L
  478-  538 (69.24/40.89)	LmlcyVAQTYGSEVILSESRTGAEVPfFETW..MQTC.MPEEGKIL.NP.DHPCFRPDSTKVESLV.........................
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     106.71|      32|     217|      46|      78|       3
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   46-   78 (53.00/38.87)	LLEQAM.IGPSPNPLIlSYLKYAISSQVKPSPLF
  265-  297 (53.72/34.79)	LLEGTMnLTGETQPLV.EQLMMVKRMQHIPTPLF
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     164.74|      50|     194|     558|     607|       6
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  558-  607 (84.95/50.51)	CLSISAAILEILNAWENGVLAFES.IQKITDNIKGKVCSLAV.CAVAWLVAH
  753-  804 (79.79/47.01)	CLDMPQVTLVLLGHILPGLLTDSSkWHSLMDPPGTALAKLAVwCALSSYSSH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP18798 with Med24 domain of Kingdom Metazoa
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