<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18782
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | RPAAGGMMDLAYVCEWEKWPKSTHCPSVPLACAWSCRNLIAFTTDLRSDDQGAGLLPGPWTVHPSVEGLRCHLLPTGSRLLSADADGQIKCWSMADHLANSWESSVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDPNRKDKFPAITHLKFLARDMSEQVSLLCQTSSIVECWSLRKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGKAEEPGAWHCTAPECLWTLALLQSVPRPRWPGAAPPLPAGTQVCLTWRWSSPTRQLSMLRISPSMGHTLDVNLALRHLLFLLEYCMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQNAALQQVLSTRILAMKASLCRLSPCTVARVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSPLRPGHSFLRDGTSLGVLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICLPSTGPGLLWVLFGCQWLLGRDEGPASEPDEALVDECCLLPSQLLIPSLDWLPVSDGLVSRLQPKQPLRLHFGKAPTLPGSATSLQLDGLIRAPGQPRIDHLRRLHLGAYPTEECKACARCGCVTMLKSPNRTTAVKQWEQRWIKNCLCGGLWRRVPLSYP |
Length | 827 |
Position | Tail |
Organism | Propithecus coquereli (Coquerel's sifaka) (Propithecus verreauxi coquereli) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Strepsirrhini> Lemuriformes>
Indriidae> Propithecus.
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Aromaticity | 0.07 |
Grand average of hydropathy | 0.055 |
Instability index | 52.32 |
Isoelectric point | 8.45 |
Molecular weight | 91252.33 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:Ensembl
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GO - Biological Function | thyroid hormone receptor binding GO:0046966 IEA:Ensembl
transcription coactivator activity GO:0003713 IEA:Ensembl
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GO - Biological Process | positive regulation of transcription initiation from RNA polymerase II promoter GO:0060261 IEA:Ensembl
|
Interaction
Repeat regions
Repeats |
>MDP18782
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 193.02| 70| 127| 525| 607| 1
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551- 673 (85.38/72.05) CAKITDVDIDKVMinlKTEEFVLDMNTLQALQQL...LQW..VGDFVLYLLAslPNQgsPLRpghsflrdgtslgvlrelmvviriwgllkpsclpvytatsdtqdsmSLLFRLLTKLWICLPSTGPG
681- 761 (107.64/61.05) CQWLLGRDEGPAS...EPDEALVDECCLLPSQLLipsLDWlpVSDGLVSRLQ..PKQ..PLR........................................lhfgkaPTLPGSATSLQLDGLIRAPG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 387.31| 117| 308| 40| 193| 2
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40- 193 (183.63/158.76) IAFT.TDLR..SDDQ.....GAGLLPGPWtvHPSV.EGLrchllptgsrllsadadgqIKCWSM.ADHL.ANS.....WESSVGSLVEGD..PIVALSWLHngvklalhveksgaSSFGEKFSRVKFSPS..............LTLFGGKPMEG..WIAVTVSglVTVSLLK....................PSGQVLTSTESLCRL
288- 333 (45.52/14.13) ..........................................................VECWSLrKEGLpVNN.....IFQQISPVV.GDkqPMI.LKW.................................................................................................RILSATNDLDRV
343- 503 (158.15/85.58) ISLTnTDLKvaSDTQfypglGKAEEPGAW..HCTApECL......................WTL.A..L.LQSvprprWPGAAPPLPAGT..Q.VCLTWRW..............SSPTRQLSMLRISPSmghtldvnlalrhlLFLLEYCMVTGydWWDILLH..VQPSMVQslveklheeytrqnaalqqvLSTRILAMKASLCRL
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