<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18589
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MCDLRRPAAGGMMDLAYVCEWEKWSKSTHCPSVPLACAWSCRNLIAFTMDLRSDDQDLTRMIHILDTEHPWDLHSIPSEHREAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESSVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNNIFQQISPVGLALAFHDGSVHIVHRLSLQTMAVFYSSATPRPVDEPAIKRPRTAGPAVHFKAMQLSWTSLALVGIDNQGKLSVLRLSPSMGHPLEVGLALRHLLFLLEYCMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQTAALQQVLSTRILAMKASLCKLSPCTVTRVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSLLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPASEPDEALVDECCLLPSQLLIPSLDWLPASDGLVSRLQPKQPLRLQFGRAPTLPGSAATLQLDGLARAPGQPKIDHLRRLHLGACPTEECKACTRCGCVTMLKSPNRTTAVKQWEQRWIKNCLCGGLWWRVPLS |
Length | 787 |
Position | Tail |
Organism | Mandrillus leucophaeus (Drill) (Papio leucophaeus) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini>
Cercopithecidae> Cercopithecinae> Mandrillus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.056 |
Instability index | 50.94 |
Isoelectric point | 7.69 |
Molecular weight | 87157.47 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP18589
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 102.24| 27| 132| 22| 48| 1
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22- 48 (53.17/31.44) EKWSKSTHCPSVPLACAWSCRNLIAFT
157- 183 (49.06/28.45) EKFSRVKFSPSLTLFGGKPMEGWIAVT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 235.93| 52| 184| 379| 430| 2
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379- 430 (87.58/52.49) FKAMQ..LSWTS....LALVGIDNQG.KL.....SVLRLSPSM......GHP....LEVGLALRHLL...FLLEYCM
463- 522 (38.02/18.65) TAALQqvLSTRI....LA........mKA.....SLCKLSPCTvtrvcdYHTklflIAISSTLKSLLrphFLNTPDK
523- 558 (47.85/25.36) SPGDR..LTEIC....AKITDVDID................................KVMINLKTEE...FVLDMNT
559- 621 (62.48/35.35) LQALQqlLQWVGdfvlYLLASLPNQG.SLlrpghSFLRDGTSL......GML....RELMVVIRIWG...LLKPSCL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 78.00| 22| 32| 691| 712| 3
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691- 712 (41.84/23.38) QPK.QPL.RLQFGRAPTLPGSAAT
724- 747 (36.16/19.26) QPKiDHLrRLHLGACPTEECKACT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 71.95| 21| 141| 289| 314| 4
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90- 110 (39.19/19.73) DQSGSRLL..SADADGQIKCWSM
289- 311 (32.76/30.54) DMSEQVLLcaSSQTSSIVECWSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.08| 15| 32| 640| 655| 6
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640- 655 (25.87/15.74) LLTKL.WICCRDeGPAS
673- 688 (23.22/ 9.68) LIPSLdWLPASD.GLVS
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