<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18558
Description |
Mediator of RNA polymerase II transcription subunit 15 |
Sequence | MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRMAQLQLQQQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPTQALPQQLQQMHHPQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIRARFPPTTAVSAVPSSSIPLGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRLEDDERQSIPSVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQACLSAA |
Length | 789 |
Position | Tail |
Organism | Mandrillus leucophaeus (Drill) (Papio leucophaeus) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini>
Cercopithecidae> Cercopithecinae> Mandrillus.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.703 |
Instability index | 88.63 |
Isoelectric point | 9.49 |
Molecular weight | 86864.66 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364148
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
nucleoplasm GO:0005654 IEA:Ensembl
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP18558
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
6| 364.12| 43| 43| 177| 219| 1
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150- 181 (52.42/ 7.88) ...QTQLQ.LQ......QVALQQ......QQQQQQFQQQQQ..AA...L.......QQQQ
182- 231 (74.41/15.15) QQQQQQFQ.AQ......QSAMQQQFQAVVQQQQQQLQQQQQQQQH...LiklhhqnQQQI
232- 270 (63.69/11.61) QQQQQQLQrMA......QLQLQQQ.....QQQQQQQQQQQQQQQA...L.......QAQP
271- 309 (57.31/ 9.50) .......P.IQ......QPPMQQPQPPPTQALPQQLQQMHHPQHHqppP.......QPQQ
335- 375 (49.94/ 7.06) ALPGQMLY.TQpplkfvRAPM......VV..QQPPVQPQVQQQTA...V.......QTAQ
437- 474 (66.35/12.49) PSPGQQVQ.TP......QS.M....PPPPQPSPQPGQPGSQPNSN...V.......SSGP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.16| 17| 21| 86| 106| 2
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86- 102 (32.30/10.28) QSLTGGPAAGAAGIGMP
108- 124 (31.86/ 9.95) QSLGGMGSLGAMGQPMS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 139.05| 35| 93| 398| 436| 3
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401- 436 (61.85/34.06) RFPPTTAVSAVPSSSIPLGrQPMAQVSQSSL..PMLSS
475- 494 (27.19/ 6.05) ......APS..PSSFLP...SPSPQPSQSPV.......
497- 526 (50.01/17.23) RTPQNF...SVPSPG.PLN.TP...VNPSSVmsPAGSS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.62| 29| 34| 534| 564| 5
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534- 564 (40.72/39.12) LDKLKQLSKYIePLRRMiNKID.KNEDRKKDL
571- 600 (46.90/33.91) LDILTDPSKRC.PLKTL.QKCEiALEKLKNDM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.24| 17| 299| 303| 329| 6
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310- 329 (30.33/11.28) PPVAQNQPSQLPPQSqtqPL
720- 736 (32.91/ 6.80) PPLELSVPADYPAQS...PL
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