<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18425
Description |
Mediator of RNA polymerase II transcription subunit 15 |
Sequence | MRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRMAQLQLQQQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPTQALPQQLQQMHHPQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQVQQQTAVQTAQAAQMVAPGVQVGLAWGVPPRLDLKAGPAWTPAHMFLSLVCSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGSSQAEEQQYLDKLKQLSKYIEPLRRMINKIDKNEDRKKDLSKMKSLLDILTDPSKRCPLKTLQKCEIALEKLKNDMAVPTPPPPPVPPTKQQYLCQPLLDAVLANIRSPVFNHSLYRTFVPAMTAIHGPPITAPVVCTRKRRLEDDERQSIPSVLQGEVARLDPKFLVNLDPSHCSNNGTVHLICKLDDKDLPSVPPLELSVPADYPAQSPLWIDRQWQYDANPFLQSVHRCMTSRLLQLPDKHSVTALLNTWAQSVHQACLSAA |
Length | 698 |
Position | Tail |
Organism | Cercocebus atys (Sooty mangabey) (Cercocebus torquatus atys) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini>
Cercopithecidae> Cercopithecinae> Cercocebus.
|
Aromaticity | 0.04 |
Grand average of hydropathy | -0.655 |
Instability index | 83.25 |
Isoelectric point | 9.47 |
Molecular weight | 77293.31 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364148
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP18425
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 102.35| 23| 23| 189| 211| 5
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189- 208 (32.93/ 6.14) ...HQ.NQQQ.IQQQQ........QQLQRMAQL
209- 230 (35.03/ 7.09) QLQ..qQQQQ.QQQQQ........QQQQQQQAL
231- 262 (34.39/ 6.80) QAQPP.IQQPpMQQPQppptqalpQQLQQMHHP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 66.41| 30| 36| 366| 400| 6
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311- 387 (21.84/ 9.00) LKFVRAPmvvqQPpvQPqvqqqtavqtaqaaqmvapgvqvglawgvpprldlkagP..AWTPAHmfLSlVCSSGP..AP.SP
388- 425 (44.57/14.58) SSFLPSP....SP..QP...................................sqsPvtARTPQN..FS.VPSPGPlnTPvNP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.60| 13| 36| 46| 68| 8
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50- 62 (23.95/10.14) QSLTGGPAAGAAG
72- 84 (23.65/15.93) QSLGGMGSLGAMG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 87.62| 29| 38| 443| 473| 9
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443- 473 (40.72/43.78) LDKLKQLSKYIePLRRMiNKID.KNEDRKKDL
480- 509 (46.90/37.97) LDILTDPSKRC.PLKTL.QKCEiALEKLKNDM
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