<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18360
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MCDLRRPAAGGMMDLAYVCEWEKWSKSTHCPSVPLACAWSCRNLIAFTMDLRSDDQDLTRMIHILDTEHPWDLHSISSEHREAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESSVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNNIFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAVFYSSATPRPVDEPAIKRSRTAGPAVHFKAMQLSWTSLALVGIDNQGKLSVLRLSPSMGHPLEVGLALRHLLFLLEYCMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQTAALQQVLSTRILAMKASLCKLSPCTVTRVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSLLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICPCSVWVLLRWQPLPGPASEPDEALVDECCLLPSQLLIPSLDWLPASDGLVSRLQPKQPLRLQFGRAPTLPGSAATLQLDGLARAPGQPKIDHLRRLHLGACPTEECKACTRCGCVTMLKSPNRTTAVKQWEQRWIKNCLCGGLWWRVPLS |
Length | 849 |
Position | Tail |
Organism | Cercocebus atys (Sooty mangabey) (Cercocebus torquatus atys) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini>
Cercopithecidae> Cercopithecinae> Cercocebus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.070 |
Instability index | 50.53 |
Isoelectric point | 8.13 |
Molecular weight | 93973.38 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP18360
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.94| 12| 134| 697| 712| 1
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697- 712 (26.37/23.56) WI..CPC.SVWvllrWQ.PL
833- 848 (17.58/ 6.31) WIknCLCgGLW....WRvPL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 262.03| 69| 370| 108| 195| 3
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120- 195 (108.29/98.90) SSVGSLVEgdpivaLSWLHNG...VKLALHvEKSGASSFGEKFSRVKFSPS....LTLFGGKPMEGWIA............VTVSGLVTVSL.LKP
436- 497 (65.17/31.34) ..............LSW.......TSLAL....VGIDNQG.KLSVLRLSPS....M....GHPLEVGLAlrhllflleycmVTGYDWWDILLhVQP
498- 566 (88.57/46.10) SMVQSLVE........KLHEEytrQTAALQ.QVLSTRILAMKASLCKLSPCtvtrVCDYHTK....LFL............IAISSTLK.SL.LRP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 106.67| 31| 36| 739| 774| 5
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739- 774 (54.10/33.56) LDWLPASDGlvsrlQPK.QPL.RLQFGRAPTLPGSAAT
777- 809 (52.57/24.47) LDGLARAPG.....QPKiDHLrRLHLGACPTEECKACT
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