<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18357
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MCDLRRPAAGGMMDLAYVCEWEKWSKSTHCPSVPLACAWSCRNLIAFTMDLRSDDQDLTRMIHILDTEHPWDLHSISSEHREAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESSVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNNIFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAVFYSSATPRPVDEPAIKRSRTAGPAVHFKAMQLSWTSLALVGIDNQGKLSVLRLSPSMGHPLEVGLALRHLLFLLEYCMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQTAALQQVLSTRILAMKASLCKLSPCTVTRVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSLLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPASEPDEALVDECCLLPSQLLIPSLDWLPASDGLVSRLQPKQPLRLQFGRAPTLPGSAATLQLDGLARAPGQPKIDHLRRLHLGACPTEECKACTRCGCVTMLKSPNRTTAVKQWEQRWIKNCLCGHGPDACVTSRAAEEAPAFVQLGPWPTYRPPRTPRSLDHPPGHPK |
Length | 874 |
Position | Tail |
Organism | Cercocebus atys (Sooty mangabey) (Cercocebus torquatus atys) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini>
Cercopithecidae> Cercopithecinae> Cercocebus.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.001 |
Instability index | 49.23 |
Isoelectric point | 7.86 |
Molecular weight | 96485.88 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP18357
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 135.51| 40| 188| 443| 482| 1
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443- 482 (70.82/43.00) LVGIDNQGKL.....SVLRLSPSMGHPLEVGLALRHLLFLLEYCM
629- 673 (64.69/38.64) LASLPNQGSLlrpghSFLRDGTSLGMLRELMVVIRIWGLLKPSCL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 326.69| 105| 200| 1| 136| 2
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22- 136 (171.18/178.74) EKWSKSTHCPSVPLACAWSCRNLIAFTMD.......LRSDDQDLTrmihilDTEhPwDLHSISSEHREAITCLEW...DQSGSRLL..SADADGQIKCWSM.ADHL.ANSWESSVGSLVeGD..PIVaLSW
157- 233 (93.62/49.16) EKFSRVKFSPSLTLFGGKPMEGWIAVTVSglvtvslLKPSGQVLT......STE.S..LCRLRG..RVALADIAF....TGGGNIV..VATADG.....................................
270- 339 (61.90/27.55) .........................................................DLN..RKDKFPAITHLKFlarDMSEQVLLcaSSQTSSIVECWSLrKEGLpVNNIFQQISPVV.GDkqPTI.LKW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 78.00| 22| 32| 743| 764| 3
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743- 764 (41.84/17.72) QPK.QPL.RLQFGRAPTLPGSAAT
776- 799 (36.16/14.58) QPKiDHLrRLHLGACPTEECKACT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 208.90| 60| 296| 514| 576| 4
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514- 576 (96.86/50.00) QTAALQQVLSTRIlamKASLCKLSP..CTVTRVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSP
812- 873 (112.03/52.45) RTTAVKQWEQRWI...KNCLCGHGPdaCVTSRAAEEAPAFVQLGPWPTYRPPRTPRSLDHPPGHP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.08| 15| 32| 692| 707| 5
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692- 707 (25.87/15.26) LLTKL.WICCRDeGPAS
725- 740 (23.22/ 9.38) LIPSLdWLPASD.GLVS
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