<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18296

Description Uncharacterized protein
SequenceMSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKEAGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSSVSKKEPAPMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESSSESSSSDSEDSETEMAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPQAAPAMKSSPPPFIATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPTRPPAVSPALTQPPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLSRPCSACSPLGPGGGQFQASLFCGASSPPSGLSPAPPAVVHVASPLTHSLSPLLGHLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPLVVVKEEKIHSPIIRSEPFSPSLRPEPPKHPESIKAPVHLPQRPEMKPVDVGRPVIRPPEQNAPPPGAPDKDKQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSSTAKSSSDSFEQFRRAAREKEEREKALKAQAEHAEKEKERLRQERMRWARALGGQQRQEQQQQQQQQAAAVAAAATPQAQSSQPQSMLDQQRELARKREQERRRREAMAATIDMNFQSDLLSIFEENLF
Length1238
PositionKinase
OrganismColobus angolensis palliatus (Peters' Angolan colobus)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia> Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini> Cercopithecidae> Colobinae> Colobus.
Aromaticity0.04
Grand average of hydropathy-0.915
Instability index75.87
Isoelectric point9.17
Molecular weight137346.62
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process
chromatin organization	GO:0006325	IEA:UniProtKB-KW









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP18296
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     190.50|      24|      24|     919|     942|       3
---------------------------------------------------------------------------
   35-   55 (31.29/ 7.53)	PQPANAASTN...PPPP......ET.SNPNK
  244-  264 (34.39/ 9.19)	PQPLQTPPPVPPQPQPP......P...APA.
  464-  483 (31.66/ 7.73)	P.VVAVSSPA..VPPPT......KV.VAP.P
  750-  777 (30.33/ 7.02)	PAP..QAAPAMKSSPPPfiatqvPV.LEPQL
  912-  933 (33.83/ 8.89)	GQ..FQASLFCGASSPP......SG.LSPAP
  934-  958 (29.00/ 6.31)	PAVVHVASPLTHSLSPL......LGhLREAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.64|      19|      24|    1006|    1028|       4
---------------------------------------------------------------------------
  308-  327 (22.32/ 6.20)	SLPPEP..KTTKLGQ.rRESSRP
 1023- 1045 (19.31/ 6.24)	SLRPEPpkHPESIKApvHLPQRP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     115.05|      15|      17|     540|     554|       5
---------------------------------------------------------------------------
  540-  554 (22.84/ 7.24)	EKDKKEKKKEKHKRK
  558-  572 (24.00/ 8.10)	EENKKSKAKEPPPKK
  582-  596 (23.58/ 7.78)	SVSKKEPAPMKSKPP
  603-  617 (21.28/ 6.09)	EEDKCKPMSYEEKRQ
 1073- 1087 (23.35/ 7.61)	DKQKQEPKTPVAPKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      89.15|      20|      60|    1136|    1155|       7
---------------------------------------------------------------------------
 1136- 1155 (33.24/16.84)	LKAQAEHAEK.EKERLRQERM
 1158- 1177 (27.83/12.96)	ARALGGQQRQ.EQQQQQQQQA
 1197- 1217 (28.07/13.13)	LDQQRELARKrEQERRRREAM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     258.77|      37|      37|      79|     115|       8
---------------------------------------------------------------------------
   79-  115 (66.33/47.26)	FAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLE
  118-  154 (65.76/46.79)	YYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALE
  372-  408 (65.57/46.63)	YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLE
  411-  447 (61.12/42.87)	EYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      66.94|      14|      31|     689|     702|      11
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  689-  702 (22.97/ 9.84)	IAGSSKMKGFSSSE
  707-  720 (19.57/ 7.35)	SESSSSDSEDSETE
  721-  734 (24.41/10.90)	MAPKSKKKGHPGRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.73|      11|      37|     824|     835|      13
---------------------------------------------------------------------------
  824-  835 (19.38/ 8.43)	PPAlHNALPQQP
 1059- 1069 (22.35/ 6.28)	PPE.QNAPPPGA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP18296 with Med12 domain of Kingdom Metazoa
Unable to open file!