<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18282
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MCDLRRPAAGGMMDLAYVCEWEKWSKSTHCPSVPLACAWSCRNLIAFTMDLRSDDQDLTRMIHILDTEHPWDLHSIPSEHREAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESSVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLRKEGLPVNNIFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAVFYSSAAPRPVDEPAIKRPRTAGPAVHFKAMQLSWTSLALVGIDNQGKLSVLRLSPSMGHPLEVGLALRHLLFLLEYCMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQTAALQQVLSTRILAMKASLCKLSPCTVTRVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSLLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPASEPDEALVDECCLLPSQLLIPSLDWLPASDGLVSRLQPKQPLRLQFGRAPTLPGSAATLQLDGLARAPGQPKIDHLRRLHLGACPTEECKACTRCGCVTMLRSPNRTTAVKQWEQRWIKNCLAVEGHGPDACVTSRAAEEAPAFVQLGPWPTHRPPGTPRCLDHPHPEDRL |
Length | 877 |
Position | Tail |
Organism | Colobus angolensis palliatus (Peters' Angolan colobus) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Catarrhini>
Cercopithecidae> Colobinae> Colobus.
|
Aromaticity | 0.06 |
Grand average of hydropathy | 0.004 |
Instability index | 49.53 |
Isoelectric point | 7.09 |
Molecular weight | 96822.23 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:Ensembl
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
thyroid hormone receptor binding GO:0046966 IEA:Ensembl
transcription coactivator activity GO:0003713 IEA:Ensembl
|
GO - Biological Process | positive regulation of transcription initiation from RNA polymerase II promoter GO:0060261 IEA:Ensembl
|
Interaction
Repeat regions
Repeats |
>MDP18282
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 135.51| 40| 184| 443| 482| 1
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443- 482 (70.82/37.03) LVGIDNQGKL.....SVLRLSPSMGHPLEVGLALRHLLFLLEYCM
629- 673 (64.69/33.28) LASLPNQGSLlrpghSFLRDGTSLGMLRELMVVIRIWGLLKPSCL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.69| 13| 299| 566| 580| 2
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566- 580 (22.83/18.04) PHFLNTPDksPGDRL
865- 877 (28.86/16.40) PRCLDHPH..PEDRL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 116.32| 38| 299| 194| 245| 3
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198- 242 (52.73/62.26) QVLTSTESLCRLRGrVALADIAftgggnIVVATADGSSASPVQFY
340- 377 (63.60/32.41) RILSATNDLDRVSA.VALPKLP......ISLTNTDLKVASDTQFY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.29| 12| 27| 89| 100| 4
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89- 100 (21.77/12.70) WDQSGSRLLSAD
118- 129 (21.52/12.47) WESSVGSLVEGD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 102.00| 22| 32| 743| 764| 5
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721- 741 (29.03/12.42) .PS.QLL.IPSLDWLPASDGLVSR
743- 764 (39.65/19.57) QPK.QPL.RLQFGRAPTLPGSAAT
776- 799 (33.32/15.31) QPKiDHLrRLHLGACPTEECKACT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 102.24| 27| 132| 22| 48| 6
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22- 48 (53.17/30.64) EKWSKSTHCPSVPLACAWSCRNLIAFT
157- 183 (49.06/27.73) EKFSRVKFSPSLTLFGGKPMEGWIAVT
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