<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18203
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MCDLRRPAAGGIMDLAYVCEWERWIKSTHCPSVPLACAWSCRNLIAFTMDLRGDDQDLTRMIHILDTEHPWDLHSIPSEHREAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESSVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTGSIVECWSLRKEGLPVNNIFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAVFYSSAAPRPVDEPAIKRPRTAGPAVHFKAMQLSWTSLALVGIDNQGKLSVLRLSPSMGHPLEVGLALRHLLFLLEYCMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQTAALQQVLSTRILAMKASLCKLSPCTVTRVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSLLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICFPSTGPGLVWVLWGWQPLPGRDDGPASEPDEALVDECCLLPSQLLIPSLDWLPASDGLVSRLQPKQPLRLQFGRAPTLPGSATTLQLDGLARAPGQPKIDHLRRLHLGAYPTEECKACTRCGCVTMLKSPNRTTAVRQWEQRWIKNCLCGGLWWRVPLSYP |
Length | 860 |
Position | Tail |
Organism | Aotus nancymaae (Ma's night monkey) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Platyrrhini> Aotidae>
Aotus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.055 |
Instability index | 48.33 |
Isoelectric point | 7.89 |
Molecular weight | 95204.63 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP18203
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 512.58| 170| 369| 260| 493| 1
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83- 181 (111.69/48.71) AITCLEW...DQSGSRLLSADAD.GQI.KCWSM.ADHL.ANSWESSVGSLVEGD.PIVaLSW................................................................................................lhngvkLALhvekSGASSFGeKFSRVKFSPSLtlfgGKPMEGWIA........................
279- 493 (234.13/230.69) AITHLKFlarDMSEQVLLCASSQtGSIvECWSLrKEGLpVNNIFQQISPVVGDKqPTI.LKWriLSATNDLdrVSAVAlPKLPISLTNTDLKVASDTQFYPGL.GLALAFHDGSVHIVHRLSLQtmavfyssaaprpvdepaikrprtAGPAVHFKAmqlswtsLAL....VGIDNQG.KLSVLRLSPSM....GHPLEVGLALRHL.LFLLEYCMVTGYdWWDILL
748- 857 (166.76/80.32) ...........................................................LDW..LPASDGL..VSRLQ.PKQPLRLQFGRAPTLPGSATTLQLdGLARAPGQPKIDHLRRLHLG........................AYPTEECKA................CTRCG.CVTMLK.SP..........NRTTAVRQWeQRWIKNCLCGGL.WWRVPL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.57| 19| 74| 551| 569| 3
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551- 569 (34.22/19.65) LFLIAISSTLKSLLRP.H.FL
626- 646 (27.35/14.30) LYLLASLPNQGSLLRPgHsFL
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