<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18202
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MCDLRRPAAGGIMDLAYVCEWERWIKSTHCPSVPLACAWSCRNLIAFTMDLRGDDQDLTRMIHILDTEHPWDLHSIPSEHREAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESSVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTGSIVECWSLRKEGLPVNNIFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAVFYSSAAPRPVDEPAIKRPRTAGPAVHFKAMQLSWTSLALVGIDNQGKLSVLRLSPSMGHPLEVGLALRHLLFLLEYCMVTGYDWWDILLHVQPSMVQSLVEKLHEEYTRQTAALQQVLSTRILAMKASLCKLSPCTVTRVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSLLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICCRDDGPASEPDEALVDECCLLPSQLLIPSLDWLPASDGLVSRLQPKQPLRLQFGRAPTLPGSATTLQLDGLARAPGQPKIDHLRRLHLGAYPTEECKACTRCGCVTMLKSPNRTTAVRQWEQRWIKNCLAVEGRGPGASVTNRSSEEAPVFLDCSQPTHRPPGTPRSLDRLSLDRLHPEDQP |
Length | 881 |
Position | Tail |
Organism | Aotus nancymaae (Ma's night monkey) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Primates> Haplorrhini> Platyrrhini> Aotidae>
Aotus.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.011 |
Instability index | 48.58 |
Isoelectric point | 7.27 |
Molecular weight | 97331.67 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:Ensembl
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
thyroid hormone receptor binding GO:0046966 IEA:Ensembl
transcription coactivator activity GO:0003713 IEA:Ensembl
|
GO - Biological Process | positive regulation of transcription initiation from RNA polymerase II promoter GO:0060261 IEA:Ensembl
|
Interaction
Repeat regions
Repeats |
>MDP18202
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 135.51| 40| 188| 443| 482| 1
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443- 482 (70.82/35.68) LVGIDNQGKL.....SVLRLSPSMGHPLEVGLALRHLLFLLEYCM
629- 673 (64.69/32.06) LASLPNQGSLlrpghSFLRDGTSLGMLRELMVVIRIWGLLKPSCL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.29| 12| 27| 89| 100| 2
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89- 100 (21.77/14.45) WDQSGSRLLSAD
118- 129 (21.52/14.18) WESSVGSLVEGD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 77.45| 22| 32| 743| 764| 3
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743- 764 (42.05/23.80) QPK.QPL.RLQFGRAPTLPGSATT
776- 799 (35.40/18.95) QPKiDHLrRLHLGAYPTEECKACT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.21| 14| 796| 18| 33| 5
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18- 33 (28.24/22.79) VCEWE.RWIKstHCPSV
816- 830 (25.98/14.25) VRQWEqRWIK..NCLAV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 75.44| 24| 299| 210| 245| 9
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213- 242 (33.73/38.72) VALADIAftgggnIVVATADGSSASPVQFY
354- 377 (41.71/15.30) VALPKLP......ISLTNTDLKVASDTQFY
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