<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18102
Description |
Mediator of RNA polymerase II transcription subunit 33a-like protein |
Sequence | MRHLIVEACIARNLLDTSAYLWPGYVNGHINQIPQCMPTQVPGWSSFMKGSPLTSVMVNALVSSPATSLAELEKIFEIAIAGSEDEKIYAATILCGASLIRGWNIQEHTVHFILRLLSPPVPVENTEGNNYLISYALILNALFVGIASIDCIQVFSLHGLVPQLACSLMPICEVFGSCMPNISWKLTSGEEISAHAVFSNVFILLLKLWKFNCPPLEHGIGDTPTVGSQLTPEYLLMVRNSHLMSAGNIRKDRNRRRLSEIASLSSPNSVFVDSFPKLKVWYRQHQACIASTLSGLVHGTPFHQIVEGLLNMMFRKINRGNQTTIASGSSSSSGPGNDDASTVPKLPAWDILEAIPFVVDAALTACAHGRLSPRELATGLKDIADFLPASLATIISYFSAEVTRGVWKPAFMNGTDWPSPAANLQNVEEQIKKILAETGVDVPSLTSGDNNSPATLPLPLAAFTSLTITYKVDRSSERFLQLAGQTLEGLAAGCPWPCMPIVASLWTQKAKRWSDFLIFSASRTVFLHNSDAVVQLVKSCFTATLGMSSSRISCSGGVGALLGHGFKSNLSGGICPVAPGILYLRAYRSVRDIVFLTEEIVSILMQSVREIVCGGLPKQQLKKLKPTKDGVGIKYGQVSLAASMTRVKLAAALGASLVWISGGLTLVQLLINETLPSWFISVHRSDQEEEKSNGMVSMLGGYALAYFAVLSGAFAWGADSSSSASKRRPKVLGTHLEFLASALDGKISLGCDPATWRAYVSGFVSLMVGCTPNWVLEVDVNVLKRLSNGLRQLNEEELALALLGAGGVGTMGAAAELIIDTEM |
Length | 823 |
Position | Tail |
Organism | Trifolium pratense (Red clover) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Trifolieae> Trifolium.
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Aromaticity | 0.08 |
Grand average of hydropathy | 0.240 |
Instability index | 44.07 |
Isoelectric point | 7.21 |
Molecular weight | 88570.54 |
Publications | PubMed=24500806
PubMed=28382043
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Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP18102
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 41.39| 11| 16| 745| 756| 1
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745- 756 (20.68/17.43) GKISL..GCDPaTW
762- 774 (20.70/11.78) GFVSLmvGCTP.NW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 333.40| 98| 319| 104| 203| 3
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104- 203 (161.53/96.60) NIQEHtVHFILRLLSPPVPVENTEGNNYLISYALILNAlFVGIA...SIDCIQVFSLHGLVPQLACSLMPICEVFGSCMPNIS..WK..LTSGEE.ISAHAVFS...NVFI
380- 425 (28.76/ 9.67) ........................................................LKDIADFLPASLATIISYFSAEVTRGV..WKpaFMNGTDwPSPAANLQ.......
426- 527 (143.12/78.43) NVEEQ.IKKILAETGVDVPSLTSGDNNSPATLPLPLAA.FTSLTityKVDRSSERFLQ.LAGQTLEGLAAGCPW..PCMPIVAslWT...QKAKR.WSDFLIFSasrTVFL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 159.44| 49| 67| 250| 299| 4
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250- 299 (82.66/56.59) RKdRNRRRLSEIASLSS....PNSVFVDSFPKLKVW..YRQHQACIASTLSGLVHG
315- 369 (76.78/47.75) RK.INRGNQTTIASGSSsssgPGNDDASTVPKLPAWdiLEAIPFVVDAALTACAHG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.28| 13| 14| 545| 558| 5
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545- 558 (19.13/13.82) LGmSSSRISCSGGV
562- 574 (24.14/12.49) LG.HGFKSNLSGGI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.44| 12| 18| 638| 649| 7
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638- 649 (18.54/10.36) VSLAASMTRVKL
658- 669 (20.91/12.64) VWISGGLTLVQL
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