<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18060
Description |
Mediator of RNA polymerase II transcription subunit 33A |
Sequence | MDLMESLAEIEKIYEIAIDGSDEEKLSAATILCGASLVRGWNVQEHTILFITKLLSPICLPNHTGTDNHLISQAPFLNVLLVGISPVDCVHIFSLHGLVPLLAAGLMQICEVFGSCDPDVSWTVATTGEKISHREVFSNAFTLLLRFWRFDHLPSEQVRVNAATPPLGSLFSPEYLLLVRNYKVASFGKSAKDSLKLKRLPKIIPFPKEPVFMDSFPKLNFWYRQHQQCIASIHSGLVPGGPVHQIVDALLCMMFRKVNDGSEPSTPTTLGSRSSSGSGSALDDALMKLKVPAWDILEAIPFVLDASLNACAYGRVSTRELATGLKDLADFIPASLVAIASYFSAEVTRGIWKPAFMNGTDWPSPAANLSLVEQQIKKILAATGVDVPSLAVDGDSPATLPLPLAAFVSLSITYKLEKGKERFLVLIGPALSAVASGCPWPCMPILTSLWIQKVKRWSDYFLLSASGTVFHHNKDAVVQLLKSCFTSTLGVGSTCMSNNGGVGALLGHGLASQVAGGISPVAPGILYLRAYRSIGDIMFLNKEIMSILMLSVRDITSSELHKGNARKQLKKFKYGMKCGEVSFVRYMARVKHAALLGASLVWISGGQKLVQSLIRDTVPSWFLSADMFEQDGGESGALVAMLSGYALAFFVMLSVAFAWGIDHCSVSPNQRAEVIWQHLEFLTSTLERNTSLRCHHATWRAYVSGFVSLLLSCTPMWVREVDAELLKRLSKGLRQLNEDELALQLLEIGGIGVMGAAAETIVKFEHML |
Length | 768 |
Position | Tail |
Organism | Trifolium pratense (Red clover) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Trifolieae> Trifolium.
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Aromaticity | 0.08 |
Grand average of hydropathy | 0.264 |
Instability index | 37.45 |
Isoelectric point | 7.27 |
Molecular weight | 83698.54 |
Publications | PubMed=24500806
PubMed=28382043
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Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP18060
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 213.56| 75| 132| 450| 525| 1
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428- 506 (125.93/83.80) GPAL.SAVASGCPwPCMPILtslWIQKVKRWSDYFLLSASGTVFHHNKDAVVQLLKSCFTSTLGVGSTCMSNNGGVGALL
507- 540 (27.44/16.47) GHGLaSQVAGGIS.PVAPGI..lYLRAYRSIGDIMFL...........................................
595- 639 (60.19/35.56) ...................................LLGASLVWISGGQKLVQSLIRDTVPSWFLSADMFEQDGGESGALV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.87| 21| 137| 89| 113| 2
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89- 113 (32.97/28.48) CvhIFSLH.GLVPllAAGLMQI.....CEVF
229- 255 (34.90/18.03) C..IASIHsGLVP..GGPVHQIvdallCMMF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 81.28| 17| 72| 136| 152| 6
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136- 152 (32.81/17.85) VFSNAFTLLLRFWRFDH
170- 183 (17.18/ 6.41) LFSPEYLLLVRNYK...
211- 226 (31.29/16.74) VFMDSFP.KLNFWYRQH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 39.20| 11| 241| 404| 414| 10
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404- 414 (19.19/12.78) LAAFVSLSITY
647- 657 (20.01/13.65) LAFFVMLSVAF
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