Description | Mediator of RNA polymerase II transcription subunit 15a-like protein |
Sequence | MDPKNWRLNQDTELTIDTTDWRAQLLPDSRQQIINKVLDTLKKHLPVNGSEGLLELQKIAQRFEDKIFTAATDESDYQRKISLKILSMDSKSRNTTTANNMLSNDIGPSNKLLSQGNCGIAPISVVERNAIWNQRKTGLNSNSKTIPSEVWPSSSTDPLGQEKEYLSTQPDHFKRQKVSLGNPSYSSERTASGTPKAKDVFETWPSEKLKYEEELQRLTDQLKEKNELIAQLKEDNFNLATKSEGEKAELSAQLESSKKACENANTLLKDAQQSLEEVRKKHSEQHC |
Length | 287 |
Position | Tail |
Organism | Trifolium pratense (Red clover) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> Hologalegina> IRL clade> Trifolieae> Trifolium. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.947 |
Instability index | 35.25 |
Isoelectric point | 6.18 |
Molecular weight | 32489.90 |
Publications | PubMed=24500806 PubMed=28382043 |
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell |
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro transcription coactivator activity GO:0003713 IEA:InterPro |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP18057 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 171.51| 41| 95| 72| 112| 1 --------------------------------------------------------------------------- 72- 112 (65.22/35.73) TDESDYQR.KISLKILSMDSKSRNTTTANNMLSNDIGPSNKL 134- 165 (43.32/21.66) ......QR.KTG...LNSNSKTIPSEVWPSSSTDPLGQEKEY 168- 209 (62.96/34.27) TQPDHFKRqKVSLGNPSYSSERTASGTPKAKDVFETWPSEKL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 64.81| 20| 20| 212| 231| 2 --------------------------------------------------------------------------- 212- 231 (32.20/19.67) EEELQRLTDQLKEKNELIAQ 234- 253 (32.60/19.99) EDNFNLATKSEGEKAELSAQ --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EVRKKH 2) KISLKIL | 277 80 | 282 86 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab