<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18053
Description |
Mediator of RNA polymerase II transcription subunit 33a-like protein |
Sequence | MLVRRKPVEGKSHTALNKAISDLEERFRVHSTETSRLYLISAIPSQLQSKGLPRGEESTGHLYGSNLRVGSDKYLASQQSIKVAISSICNYLNNPRAKKIECPPGISATLFVLDAALTACAHGRLSPRELATGLKDLAYFFSATLATIVSYFSAEVTQGIWKPAYMNGTDWPSPAANLSMVEQQIKKIIAATGVDVPSLPVGGNSPTTLSLPLAAFVSLTITYKFDKASERFLVLIGPALNALASACPWPCMPIVASFNGGVGALLGHGFCSHLSGGISPVAPGILYLRVFRSVRDAIMFLTEEIVSLLVLSVRDIASSGLAKGQMEKLKKTKYGMRYGQASLATSMTRVKHAALLYLGPHWFGYQADQAWFNL |
Length | 374 |
Position | Tail |
Organism | Trifolium pratense (Red clover) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Trifolieae> Trifolium.
|
Aromaticity | 0.09 |
Grand average of hydropathy | 0.137 |
Instability index | 37.24 |
Isoelectric point | 9.47 |
Molecular weight | 40354.37 |
Publications | PubMed=24500806
PubMed=28382043
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Function
Annotated function |
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP18053
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 228.97| 71| 76| 137| 211| 1
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128- 206 (112.80/74.81) RELATglkdLAYFFSATLATIVSYFSAE..VTQGIWKPAYMNGTDWPSpaanLSMVEQQIKKIIAATGVDVPSLPVGGNSP
207- 280 (116.17/68.48) TTLSL...pLAAFVSLTITYKFDKASERflVLIGPALNALASACPWPC....MPIVASFNGGVGALLGHGFCSHLSGGISP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 33.43| 10| 210| 74| 85| 2
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74- 83 (16.03/14.08) YLASQQSIKV
91- 100 (17.40/ 6.94) YLNNPRAKKI
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