<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP18051
Description |
U-box domain-containing protein 33-like (Fragment) |
Sequence | YGKNELPHLEDLQPNSARTAVCSEIRSLDLGEIIETEATNSSKSSSCSSYCSPQNSTAVYLDAYSEVMEERINSQLIETQREAEAATDESFAELIKCRRSEAEAAEAMQKVKLFESAHAHEVELRKEAEVALRDTVLEQQKLLEESERISGELQMTMRNVALLDSRAKETIRRRDEAAHELLLIQTSISTLWQERQQIRRQKMEALRWLERWKSRGQIGAAHYNGVIGFAEELPELAEFSLSDIENATCNFSESFKIAQGGFGCIYKGEMLGRTVAIKKFHQQNVQGPAEFHREVQILSSLQHPHLLTLLGVCPEAWSIVYEYLPNGTLQNYLFRKSNIIPLTWNIRTRMIAEISSALCFLHSFKPEAIIHGDLKPETILLDSSLSCKICEFRFSRLGTEESLYSPSSSFRLSTEPKGAFTYTDPEFQRTGVLTTKSDIYSFGLIILQLLTGRTPVGLAVLVRHAVSFGKLSSILDSSAGEWPLSVASRLVELGLQCCAQNRRSRPELTPTLVRELEQLHVSEERPVPSFFLCPILQEIMHDPQIAADGFTYEGDAIREWLENGHDTSPMTNLKLNHLLLTPNHSIRLAIQDWLCKS |
Length | 597 |
Position | Tail |
Organism | Trifolium pratense (Red clover) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Trifolieae> Trifolium.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.290 |
Instability index | 52.48 |
Isoelectric point | 5.48 |
Molecular weight | 67420.81 |
Publications | PubMed=24500806
PubMed=28382043
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Function
Annotated function |
Functions as an E3 ubiquitin ligase.
ECO:0000256 ARBA:ARBA00003861
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GO - Cellular Component | |
GO - Biological Function | ATP binding GO:0005524 IEA:InterPro
protein kinase activity GO:0004672 IEA:InterPro
ubiquitin-protein transferase activity GO:0004842 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP18051
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 62.34| 19| 25| 441| 459| 1
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441- 459 (32.88/20.23) SFGLI..ILQLLTGRTPVGLA
467- 487 (29.46/17.41) SFGKLssILDSSAGEWPLSVA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.53| 12| 17| 75| 86| 2
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75- 86 (20.97/ 9.61) QLIETQR.EAEAA
93- 105 (17.56/ 7.15) ELIKCRRsEAEAA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.96| 13| 26| 15| 27| 3
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15- 27 (22.53/14.13) NSARTAVCSEIRS
40- 52 (24.43/15.90) NSSKSSSCSSYCS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 71.60| 25| 26| 148| 173| 4
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148- 173 (33.74/23.63) RISGELQMTMRNVALLdSRAKETIRR
176- 200 (37.86/21.72) EAAHELLLIQTSISTL.WQERQQIRR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.40| 27| 29| 332| 360| 8
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334- 360 (47.72/38.06) FRKSNIIPLTWNIRTRMI.AEISSALC.F
364- 392 (38.68/22.24) FKPEAIIHGDLKPETILLdSSLSCKICeF
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