<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17991

Description Uncharacterized protein
SequenceMGNSLHKACSEKDLQKVRVLVLQHPGQINQQEKEMDWTPLHIAAFKGSDPIVRELMARGARHDITDKEGRTALHLAALNGFSAVVTDLLRRGASPAARDKNGKAPYDYAVQKHPNVAALLGGPPPPATQPAAAAADAGDWGGTVASPRSAGGAAAAAPQPQPSGRLASGPGGSQHDLFAGAHAPPAAQPGLGYPAAPAFPVSPTAAATGVPPYGYGYGAGAYGTAPPPNTSVAPPAAGAYAYPQRPQPYQAPTGAAAPPPQPQQQPYYQYPSAPAPGNAGGAAAAASHPPPAPPTAPSVPVAPAHSGPPPHGREGGGGGNSSVAPPPAPASDLDWGPPAPSDWGDEPDTAADAPPPRRPGFNPIMSARFQLEKLLGAGLAQLGIHSGGGAGNGQWGHGGGGGGSAHGSTSASQPLSQQGSGSTLPPTPGRTAPAYHPPGQPHPHLHPHQAGPSPLGPMAGHGGLLSEGSTTSVSSISMAGRTYSYDDLRAATGGFSPINKLGEGGYGPVYRGTLDGIPVAVKVMDCTEGAMQGRNEFEAEVRILSGLHHPHVVLLIGSCPDKGILVYELMPNGSLETHLFGWEGGRSANAGGARGPVPLGWRHRVRIAAEVASALLFLHSAPTPIVHMDLKPANILLDEHLTAKLGDVGLARLAPTLGAPSGPAAAAAAAAGGVKSTIKDSRLVGTFEYMDPEYMRTGEYSARSDVYALGMVLLQLLTGREGAQVVSVVESARRQPLGFGPCIDPRAGDWPAAEAMAFADLALRCVEYRRQDRPDLRTVVLPTLMQLKQRTQLYEQQQPTAASSPSPLGGDAVPPMFLCPITQDVMEDPVVAADGYTYERLAITEWVSRSPTSPLTNMRLEHTQVVPNLTLRSAIKEWRQQQQHPRRSGPGAVVGAVVGTGAGAPEGAPSAPPMTSAPPVRARADAGGW
Length929
PositionTail
OrganismChlamydomonas reinhardtii (Chlamydomonas smithii)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Chlorophyta> core chlorophytes> Chlorophyceae> CS clade> Chlamydomonadales> Chlamydomonadaceae> Chlamydomonas.
Aromaticity0.06
Grand average of hydropathy-0.314
Instability index50.70
Isoelectric point6.88
Molecular weight95327.02
Publications
PubMed=17932292

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17991
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     603.03|     100|     101|     148|     247|       1
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   59-  158 (87.98/17.00)	........................GARHDITdkEGRTA........LHLA..ALNG.FsavvtdllrrGASPAArDKNG............KAPYDYAV..................QkhpnvAALLGGPPPPATQPAAAAADAGDWGGTVA...spRSAGGAAAAAP
  159-  260 (193.86/47.16)	QP...Q.......PSGR.LASGPGGSQHDLF..AGAHAPPA.AQPGLGYP..AAPA.F..........PVSPTA.AATG............VPPYGYGY..................G.....AGAYGTAPPPNTSVAPPAAGAYAYPQRPQ...pyQAPTGAAAPPP
  261-  337 (120.74/26.33)	QP...QqqpyyqyPS....APAPGNAGGAAA..AASH.PPP.A.P....P..TAPS.V..........PVAP...AHSG............PPPHGREG..................G.....GG..G.....NSSVAPPPAPASDLDWGP.................
  338-  412 (95.64/19.19)	.P...A.......PS.......DWGDEPD....TAADAPPP.RRPGFN.P..IMSArF..........QLEKLL.GA.G............LAQLGIHS..................G.....GGA.GNG..................QWGHgggggGSAHGSTSAS.
  413-  507 (53.43/ 7.17)	QPlsqQ.......GSGStLPPTPGRT.......APAYHPPGqPHPHL.HPhqAGPS............PLGPMA.GHGGllsegsttsvssISMAGRTYsyddlraatggfspinklG.....EGGYG........................................
  796-  839 (51.38/ 6.58)	QQ...Q.......PTA...ASSPSPLGGD........AVP....PMFLCP..ITQD.V..........MEDPVV.AADG...............YTYE......................................................................
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.51|      30|      79|     641|     671|       2
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  641-  671 (47.03/24.07)	LTAKLGD.....VGLARLAPtLG.APS.GPAAAAAAAA
  717-  753 (44.48/18.79)	LTGREGAqvvsvVESARRQP.LGfGPCiDPRAGDWPAA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17991 with Med32 domain of Kingdom Viridiplantae
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