<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17977

Description Uncharacterized protein
SequenceMIDKDDVAKGLEELIALHGITKLVMGAASDKNYSKKLKTPKSKTSLRLMEAGAPSCKIWFTCKGILICTREANTTVPAVPPSPAPTVASTLSENSISSHMRSLTIHHTESEASSSNGSPKQGLNRSVTAVPRHTSRAAGSTPSRLFEPFKLNANSRPPRTPMSSLDSWDDFGRRSESSWYNLSRNGDATSVSESAMQHPLNESDDDRLSSPSHELESSGVDAEMYARLEEALRESQESKKEAFEESTKRRKADHELFSALHKAKELEKLYHHEIRQRKTIEETLLRQTQEIQEMTILRDTIYNDLHDAEEQKIILEQCVTKTKSTLESHEEKLATSKYLIEVLQADKVKLQQERDAAVTAAEELRQKNEQRISMPTEALNTEFSAFELEQATRCFDEALKIGKGGFGCVYKGSLRNTTVAIKLLHPESLQGQSEFNQEVAVLGRVRHPNLVALIGSCRETFGLVYEFLPNGSLEHRLACTNNTRPLTWQVRTRIIYEMCSALSFLHSNKPHPVVHGDLKPANILLDANLVSKLGDFGICRFLTQSNASATTTLHRTTTPRGTFAYMDPELLSTGEITPRSDVYSFGIIILQLLTGRPPQKIAEVVEDAVVNRDLHSILDPSAGSWPFVQANQLAHLGLRCAEMSRRRRPDLARDVWMVVEPLMKAASLTAGRPTFAAASRGEASTPSYFVCPIFQELMNDPHIAADGFTYEAEAIRGWLDSGHDTSPMTNLKLAHRELTPNRGLRSVILEWQQQQRQQELDEDWR
Length765
PositionTail
OrganismBrachypodium distachyon (Purple false brome) (Trachynia distachya)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Brachypodieae> Brachypodium.
Aromaticity0.06
Grand average of hydropathy-0.503
Instability index51.09
Isoelectric point6.30
Molecular weight85548.67
Publications
PubMed=20148030

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17977
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     170.09|      67|      78|     281|     358|       1
---------------------------------------------------------------------------
  224-  274 (52.09/37.66)	....................MYARLEEAlrESQE...........SKKEAFEESTKRRKADHELFSAlHKAKeLEKLYHHEI
  281-  358 (88.36/108.35)	EEtlLRQTQEiQEMTILRDTIYNDLHDA..EEQKiiLEQcvtktkSTLESHEEKLATSKYLIEVLQA.DKVK.LQQERDAAV
  362-  390 (29.64/16.01)	EE..LRQKNE.QRISMPTEALNTEFSAF..E.....LEQ...........................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     290.29|      91|     434|      58|     159|       2
---------------------------------------------------------------------------
   58-  153 (143.43/96.31)	IWFTCKGILICtrEANTTVPAVPPSPAPtvASTLSENSISSHMRSLTIHH..TESEASSSNGSPKQGLNRSVTAV..PRHTSRAAgSTPSRLFEPFKLNA
  495-  589 (146.86/83.86)	IYEMCSALSFL..HSNKPHPVVHGDLKP..ANILLDANLVSKLGDFGICRflTQSNASATTTLHRTTTPRGTFAYmdPELLSTGE.ITPRSDVYSFGIII
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17977 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) SISSHMRSLTIHHTESEASSSNGSPKQGLNRSVTAVPRHTSRAAGSTPSRLFEPFKLNANSRPPRTPMSSLDSW
2) WYNLSRNGDATSVSESAMQHPLNESDDDRLSSPSHELESSGVDAEMYARLEEALRESQESKKEAFEESTK
95
179
168
248










Molecular Recognition Features






MoRF SequenceStartStop




NANANA