<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17968

Description Uncharacterized protein
SequenceMLPFQCFCSRRGLQCREVILDGTDVPKAIVDFVVQYNVDKIVLGSSTRSAFTRTIWKMDVATSVTKYAPNFCSVYVIAKGKLSTFRPATHANENDMSEEDIKSDAAGNRLLAVKSEQAHNFPGKEPYSYRLMSTHAAMHIGTNADESAEGGKFKAPSQQRSVDSHLVKTSSCPSEFIRTMNQRSSHLSPEYPDNRRDTLFLLNKDNEHAFQAPHGKYLGIDDNALSLEYNACDPLMPSGQCASSTFNYQTENVETDPRHFQQKNGNILPQNYRELPLEPRDGIENSYAIDKQDIDPLRSRYDAETSSAVRGPKQKLLTLETSSSDPQHRERIIEEFVDHNSQRQVHPMLRRLPPKFFSPRNDRHGSASEEKHILEPDSNPLPRPIETKRILECLPTRLECRLYNPNEIAKATRNFSAELKVGEGGYGPVYKATLDNTLVAVKILHSNVTQGLKQFQQEIDLLNNLRHPNMVHLVGACPEYGCLVYEYMPNGSLEDCLYCRSGTPPLPWQLRFKIAVEIATGLLYLHKMKPAAFVHRDLKPGNILLDENFVSKIADVGLARIIPRSMDETKTQYRMTDAAGTFCYIDPEYQKTGLVSTKSDVYALGIIYLQIITAKDAMGLAYGVSDALEEGTFEELLDPKVTGWPVEETKKFAELALKCCELRRRDRPDLESVVLPELISLHRLAVPSAYPSMNQPHQSSASDKDLALGDDSLADDLTEGSVKVPSLSA
Length729
PositionTail
OrganismBrachypodium distachyon (Purple false brome) (Trachynia distachya)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Brachypodieae> Brachypodium.
Aromaticity0.07
Grand average of hydropathy-0.491
Instability index51.45
Isoelectric point5.94
Molecular weight81733.58
Publications
PubMed=20148030

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17968
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     107.78|      24|      48|     205|     228|       1
---------------------------------------------------------------------------
  205-  228 (43.80/27.95)	DNE..HAFQAPHGKYLGIDDNALSLE
  256-  278 (41.89/26.41)	DPR..H.FQQKNGNILPQNYRELPLE
  302-  320 (22.10/10.49)	DAEtsSAVRGPKQKL.......LTLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.71|      28|      48|     351|     380|       2
---------------------------------------------------------------------------
  351-  380 (48.11/25.45)	RLPPKFFSP....RNDRHGSAseEKHILEPDSNP
  397-  428 (45.59/19.66)	RLECRLYNPneiaKATRNFSA..ELKVGEGGYGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.89|      29|      48|      81|     109|       4
---------------------------------------------------------------------------
   81-  109 (49.45/29.54)	KLSTFRPATHANEN.DMSEEDIKSDAAGNR
  130-  159 (46.44/27.35)	RLMSTHAAMHIGTNaDESAEGGKFKAPSQQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17968 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PMLRRLPPKFFSPRNDRHGSASEEKHILEPDSNPL
2) SSTFNYQTENVETDPRHFQQKNGNILPQNYRELPLEPRDGIENSYAIDKQDIDPLRSRYDAETSSAVRGPKQKLLTLETSSSD
347
243
381
325










Molecular Recognition Features






MoRF SequenceStartStop




1) ADDLT
714
718