<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17948
Description |
Uncharacterized protein |
Sequence | METLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATNQSDYLRKISLKMLTMETKSQNTIPTGNGNKPLDPGASHSMPPQVHNQGQSLPISLSSNQPQARQQLSQNMQNSMSSNGVQSSAGLQSAMPSVSSLTQTIANTVGQNANMQSISGVSQNPVGNLMGQGIPSNMFVNSQRQMPGRQQVVPPQQQQQSQNPQQYLYQQQIQQQLLKQKLQQGNHPHSLVQSHIHHQQQQQNLLQPNQLQSGLQTSTVMQPSMMQTVSGLQQNQPSSVQQSTQPMHQQHPQSVLRQQQQQPQQSAGIHQQQTPMMQQPLLPPQQQLMGQQSNTTNMSQNQLIGQQNIVGDLQQQQQRLLGQQNNLQNLQQQQQQLMAQQNNLSSMHQQQLGPQSNVTGLQQQQLLGAQPGNSSMQSNQHSLHMLQQPKVTLQQQAQQSGSALLPNQGQQSHSQLPQQQLMAQIQSQPGQLQQQSNPLQRDLQQRLQASGSLLQQPNVIDQQKQLYQPQRALPETSSTSLDSTAEIGHANGADWQEEIYQKIKVMKETYLPEINEMYQRIATKLQQHDPLPQQPKSEQLEKLKVFKVMLERLITFLQVSKNNITPNFKEKLGFYEKQIVGFLNPSRYRKPIPNLQQGQPPQPRIQPMQQPQSQVPQLQSHENQLIPQLQSMNTQGSVPQMQQNNMSSLLHNSLSTLSGDSTSQSNMMNPIQPGSNLDSGQGNALSSLQQTPVGSVQQNLVSISQPTKVNTLSTQSGGSMLQPNIPLQSNSNMIQHQHLKQQQQQQHEQQMLQTQQLKRFQQHQNLMQNQQMQQQQLHQQAPSPMPGDSDKPVSGISSLLDTGNIVHQPSVAQALAPSLAIGTPGISASPLLAEFTSPDGAHGGALTTVSGKSNVTEQSLECLIKAVKSLSPKALSASVGDIGSVVSMIDRIAGSAAGNGSRAAAGEDLVAMTGCHLLSFLSFLFFTCFSQDGNSRE |
Length | 967 |
Position | Tail |
Organism | Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.773 |
Instability index | 72.39 |
Isoelectric point | 9.29 |
Molecular weight | 106756.49 |
Publications | PubMed=16973872
|
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | chromatin DNA binding GO:0031490 IBA:GO_Central
transcription coactivator activity GO:0003713 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP17948
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 69.75| 26| 31| 362| 392| 3
---------------------------------------------------------------------------
362- 392 (31.15/13.79) QQQQQlMAqQnnLSSmHQQQLGPQSNVTGLQ
640- 665 (38.60/ 6.12) QPQSQ.VP.Q..LQS.HENQLIPQLQSMNTQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 119.57| 29| 31| 745| 773| 4
---------------------------------------------------------------------------
431- 458 (38.43/ 6.96) GSALL.PN..QGQQSHSQLPQQQLMAQIQ...SQ
747- 777 (44.74/ 9.49) GGSMLQPN..IPLQSNSNMIQHQHLKQQQ.qqQH
778- 811 (36.39/ 6.14) EQQMLQTQqlKRFQQHQNLMQNQQMQQQQlhqQA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.00| 16| 16| 78| 93| 5
---------------------------------------------------------------------------
78- 93 (26.80/ 7.41) PQVHNQGQSLPISLSS
185- 200 (27.21/ 7.71) PQQQQQSQNPQQYLYQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 156.54| 30| 77| 467| 496| 11
---------------------------------------------------------------------------
467- 496 (51.80/25.45) N...........PLQRDLQQR....LQASGSL.....LQQPNVIDQ....QKQL
498- 529 (36.80/15.64) Q...........P.QRALPE......TSSTSLdstaeIGHANGADW....QEEI
530- 573 (32.73/12.98) YqkikvmketylPEINEMYQRiatkLQQHDPL.....PQQPKS.EQ....LEKL
578- 609 (35.21/14.60) V...........MLER.LITF....LQVSKNN.....IT.PNFKEKlgfyEKQI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.20| 14| 154| 167| 183| 14
---------------------------------------------------------------------------
167- 183 (22.73/19.54) NMfvnSQRQMPGRQQVV
327- 340 (26.47/13.25) NM...SQNQLIGQQNIV
---------------------------------------------------------------------------
|