Description | Uncharacterized protein |
Sequence | MLTMETKSQNTIPTGNGNKPLDPGASHSMPPQVHNQGQSLPISLSTNQPQACQQLSQNMQNSMSSNGVQSSAGLQSAMPSVSSLTQTIPNTVGQNANMQSISGVSQNPVGNSMGQGIPSNMFVNSQRQMPGRQQVVPPQQQQQSQNPQQYLYQQQIQQQLLKQKLQQGNHPHSHVQSHIHQQQQQQNLLQPNQLQSGLQTSTVMQPSMMQTVSGLQQNQPSSVQQSTQPMLQQHPQSVLRQQQQPQQSAGIHQQQTPMMQQPLLPPQQQLMGQQSNTTNMSQNQLTGQQNIVGDLQQQLGQQNNLQNLQQQQLMAQQNNLSSMHQQQLGPQSNVTGLQQQQLLGAQPGNSSMQSNQHSLHMLQQPKVTLQQQAQQSGSALLPNQGQQSHSQLPQQQLTAQIQSQPGQLQQQSNPLQHDLQQRLQASGSLLQQSNVIDQQKQLYQPQRALPETSSTSLDSTAESGHANGADWQEEIYQKIKVMKETYLPEINEMYQRIATKLQQHDPLPQQPKSEQLEKLKVLKVMLERLITFLQVSKNNITPNFKEKLGFYEKQIVGFLNPSRYRKPIPNLQQGQPPQPRIQPMQQPQSQVPQLQSHENQLIPQLQSMNTQGSVPQMQQNNMSSLLHNSLSTLSGDSTSQSNMMNPIQPGSNLDSGQGNALSSLQQTPVGSVQKNLVSISQPTKVNTLSTQSGASMLQPNIPLQSNSNMIQHQHLKQQQQQHEQQMLQTQQLKRLQQHQNLMQNQQMQQQQLHQQAPSPMPGDSDKPVSGISSLLNTGNIVHQPSVAQAPAPSLAIGTPGISASPLLAEFTSPDGAHGGALTTVSGKSNVTEQSLECLIKAVKSLSPKALSASVGDIGSVVSMIDRIAGSAAGNGSRAAAGEDLVAMTGCHLLSFLSFLFFTCFSQHGNSRE |
Length | 912 |
Position | Tail |
Organism | Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus. |
Aromaticity | 0.02 |
Grand average of hydropathy | -0.776 |
Instability index | 72.53 |
Isoelectric point | 9.08 |
Molecular weight | 100031.74 |
Publications | PubMed=16973872 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro transcription coactivator activity GO:0003713 IEA:InterPro |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP17947 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 7| 955.15| 126| 126| 126| 251| 1 --------------------------------------------------------------------------- 16- 104 (79.49/10.23) .......................................................................NGNKPLDPGASHsmppqVHNQGQ......SLPIsL...STN..........QPQACQQLSQNMQNSMssngVQS.SAGLQSA.....MP...SVSSLTQT...I....PNTV.GQNANMQSISGV 126- 251 (235.07/49.84) QRQ..............MPG...RQQ.VVPP.QQQ...QQS...QNPQQYLYQQQI..QQQL...LKQKLQQGNHPHSHVQSH.....IHQQQQ......QQNL.L...QPN..........QLQSGLQTSTVMQPSM....MQT.VSGLQQN.....QP..SSVQQSTQP...MLQQHPQSVLRQQQQPQQSAGI 253- 379 (145.29/26.99) QQQ..............TPM...MQQpLLPP.QQQlmgQQS....NTTN.MSQNQLtgQQNIvgdLQQQLGQQNN....LQ.........NLQQ......QQLM.A...QQN..........NLSSMHQQQ..LGP......QSN.VTGLQQQqllgaQPgnSSM.QSNQHslhMLQQ.PKVTL..QQQAQQSGSA 384- 469 (120.35/20.64) Q...............................GQQ...SHS...QLP.....QQQL..TAQ..................IQSQ.....PGQLQQ......QSNP.L...QHD...........LQQRLQAS....GSL....LQQ.SNVIDQQ............KQLYQP.qrALPETSSTSLDSTAESGHANGA 470- 602 (132.23/23.66) DWQeeiyqkikvmketyLPEineMYQ.RIAT.KLQ...QHD...PLP.....QQPK..SEQL...EKLKVLK.....VMLERL.....ITFLQV......SKNN.I...TPNfkeklgfyekQIVGFLNPSRYRKP..........IPNLQQG.....QP..P..QPRIQP...M..QQPQSQV.PQLQSHENQLI 604- 722 (133.81/24.06) QLQ..............SMN...TQG.SVPQmQQN...NMSsllHNSLSTLSGDST..SQSN...MMNPIQPGSNLDSGQGNA.....LSSLQQtpvgsvQKNL.VsisQPT..........KVNT...LSTQSGASM....LQ...............P..NIPLQSNSN...MIQHQH...LKQQQQQ.....H 723- 807 (108.91/17.72) EQQ..............MLQ...TQQ.LKRL.QQH...QNL...MQNQQ.MQQQQL..HQQA...PSPMPGDSDKPVSGISS.....................L.L...NTG..........NI........VHQPSV....AQApAPSLAIG.....TP...GI..SASP...LL.................... --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) IVGFL 2) RYRKPI | 555 563 | 559 568 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab