Description | Uncharacterized protein |
Sequence | METLKRHLPFSGQEGLQELKKVAVRFEEKIYTAATNQSDYLRKISLKMLTMETKSQNTIPTGNGNKPLDPGASHSMPPQVHNQGQSLPISLSTNQPQACQQLSQNMQNSMSSNGVQSSAGLQSAMPSVSSLTQTIPNTVGQNANMQSISGVSQNPVGNSMGQGIPSNMFVNSQRQMPGRQQVVPPQQQQQSQNPQQYLYQQQIQQQLLKQKLQQGNHPHSHVQSHIHQQQQQQNLLQPNQLQSGLQTSTVMQPSMMQTVSGLQQNQPSSVQQSTQPMLQQHPQSVLRQQQQPQQSAGIHQQQTPMMQQPLLPPQQQLMGQQSNTTNMSQNQLTGQQNIVGDLQQQLGQQNNLQNLQQQQLMAQQNNLSSMHQQQLGPQSNVTGLQQQQLLGAQPGNSSMQSNQHSLHMLQQPKVTLQQQAQQSGSALLPNQGQQSHSQLPQQQLTAQIQSQPGQLQQQSNPLQHDLQQRLQASGSLLQQSNVIDQQKQLYQPQRALPETSSTSLDSTAESGHANGADWQEEIYQKIKVMKETYLPEINEMYQRIATKLQQHDPLPQQPKSEQLEKLKVLKVMLERLITFLQVSKNNITPNFKEKLGFYEKQIVGFLNPSRYRKPIPNLQQGQPPQPRIQPMQQPQSQVPQLQSHENQLIPQLQSMNTQGSVPQMQQNNMSSLLHNSLSTLSGDSTSQSNMMNPIQPGSNLDSGQGNALSSLQQTPVGSVQKNLVSISQPTKVNTLSTQSGASMLQPNIPLQSNSNMIQHQHLKQQQQQHEQQMLQTQQLKRLQQHQNLMQNQQMQQQQLHQQAPSPMPGDSDKPVSGISSLLNTGNIVHQPSVAQAPAPSLAIGTPGISASPLLAEFTSPDGAHGGALTTVSGKSNVTEQSLECLIKAVKSLSPKALSASVGDIGSVVSMIDRIAGSAAGNGSRAAAGEDLVAMTGCHLLSFLSFLFFTCFSQHGNSRE |
Length | 959 |
Position | Tail |
Organism | Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus. |
Aromaticity | 0.03 |
Grand average of hydropathy | -0.771 |
Instability index | 71.63 |
Isoelectric point | 9.24 |
Molecular weight | 105510.02 |
Publications | PubMed=16973872 |
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell |
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro transcription coactivator activity GO:0003713 IEA:InterPro |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP17945 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 7| 969.28| 126| 126| 173| 298| 1 --------------------------------------------------------------------------- 36- 151 (99.34/15.52) .............................................NQSDYL..RKI..SLKM...LtmETKSQntiptgNGNKPLDPGASHsmppqVHNQGQ......SLPIsL...STN..........QPQACQQLSQNMQNSMssngVQS.SAGLQSA.....MP...SVSSLTQT...I....PNTV.GQNANMQSISGV 173- 298 (235.69/49.42) QRQ..............MPG...RQQ.VVPP.QQQ...QQS...QNPQQYLYQQQI..QQQL...L..KQKLQ......QGNHPHSHVQSH.....IHQQQQ......QQNL.L...QPN..........QLQSGLQTSTVMQPSM....MQT.VSGLQQN.....QP..SSVQQSTQP...MLQQHPQSVLRQQQQPQQSAGI 300- 426 (143.87/26.59) QQQ..............TPM...MQQpLLPP.QQQlmgQQS....NTTN.MSQNQLtgQQNIvgdL..QQQLG......QQNN....LQ.........NLQQ......QQLM.A...QQN..........NLSSMHQQQ..LGP......QSN.VTGLQQQqllgaQPgnSSM.QSNQHslhMLQQ.PKVTL..QQQAQQSGSA 431- 516 (119.50/20.53) Q...............................GQQ...SHS...QLP.....QQQL..TAQ..........................IQSQ.....PGQLQQ......QSNP.L...QHD...........LQQRLQAS....GSL....LQQ.SNVIDQQ............KQLYQP.qrALPETSSTSLDSTAESGHANGA 517- 649 (131.14/23.43) DWQeeiyqkikvmketyLPEineMYQ.RIAT.KLQ...QHD...PLP.....QQPK..SEQL...E..KLKVL......K.....VMLERL.....ITFLQV......SKNN.I...TPNfkeklgfyekQIVGFLNPSRYRKP..........IPNLQQG.....QP..P..QPRIQP...M..QQPQSQV.PQLQSHENQLI 651- 769 (132.84/23.85) QLQ..............SMN...TQG.SVPQmQQN...NMSsllHNSLSTLSGDST..SQSN...M..MNPIQ......PGSNLDSGQGNA.....LSSLQQtpvgsvQKNL.VsisQPT..........KVNT...LSTQSGASM....LQ...............P..NIPLQSNSN...MIQHQH...LKQQQQQ.....H 770- 854 (106.89/17.40) EQQ..............MLQ...TQQ.LKRL.QQH...QNL...MQNQQ.MQQQQL..HQQA...P..SPMPG......DSDKPVSGISS.....................L.L...NTG..........NI........VHQPSV....AQApAPSLAIG.....TP...GI..SASP...LL.................... --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) IVGFL 2) RYRKPI | 602 610 | 606 615 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab