<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP17926

Description Uncharacterized protein
SequenceMWMPRSMPEKRNGGNGLIAVAIDKDKGSQIALKWTIDNLLVKGQTVILIHVNLKSSLSSYYASPRLNQISDSNGTSSPDSKDLFLPFRCFCTRKDINCKDVVLEDTDVAKALTEYVTQTAIETLIVGASAKGGFLRFKAADVAGSVSKGAPDFCTVYVIAKGKIQSMRAASRSSPVNSSLHNQLNQNSTTPASMDAHTPRTRVKRVAEKPPLELPRKSVGDTESFRSPFTRRGLTGKSYGELSVPDTDISFVSSGRPSIDRIFPAFYDNTETSRTPPRLSNFSDIDSNYSFESLHHGRKSLDQGGFSPELSTFSNESDQMPSAADDVEAEMRRLKLELKQTMEMYSSACREALTAKQKTRELQRWKIEEEQKLEEARLAEEAALAIAEKEKAKSKAAIEAAEAAQRIAELESQKRINAEMKARKEAEEKRKALDALANSDVRYRRYSIEEIEAATDYFSQSLKIGEGGYGPVYKSYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLFCRGNSPPLSWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMFLQVLTAKPAMGLTHHVDRALEKGTFAQMLDPAVPDWPIEEATLFGKLALKCAELRRKDRPDLGKVVLPELKRMRAFAEESMHHHSLSSTSPVARSPKFSQVSMQLNDHPSSRSEVSSRSPSSLA
Length775
PositionTail
OrganismPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus.
Aromaticity0.07
Grand average of hydropathy-0.422
Instability index50.33
Isoelectric point8.50
Molecular weight86038.94
Publications
PubMed=16973872

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP17926
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     191.98|      45|      47|     346|     390|       1
---------------------------------------------------------------------------
  298-  340 (48.96/31.33)	....RKSLDQGGFSPELSTFS.NESDQMP.SAADdvEAEMRRLKLELKQ
  346-  390 (70.21/48.30)	SSACREALTAKQKTRELQRWK.IEEEQKL.EEAR..LAEEAALAIAEKE
  394-  440 (51.21/33.13)	SKAAIEAAEAAQRIAELESQKrINAEMKArKEAE..EKRKALDALANSD
  442-  466 (21.60/ 9.48)	...............RYRRYS.IEE...I.EAAT..DYFSQSLKIGE..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     141.60|      42|     340|     248|     289|       3
---------------------------------------------------------------------------
  248-  289 (75.68/49.44)	DISFVSS.GRPSIDRIF.PAFYDNTETSRTPPRLSNFSDIDSNY
  589-  632 (65.91/42.12)	DRNFVSKiSDVGLARLVpPSVADNVTQYRMTSTAGTFCYIDPEY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     153.20|      47|     569|     100|     146|       4
---------------------------------------------------------------------------
  100-  146 (75.02/61.61)	DVVLEDTDVAKALTEYVTQTAIE..TLIVGASAKGGFLRFKAADVAGSV
  668-  716 (78.17/64.56)	DRALEKGTFAQMLDPAVPDWPIEeaTLFGKLALKCAELRRKDRPDLGKV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.03|      20|      27|     199|     222|       5
---------------------------------------------------------------------------
  199-  222 (27.07/27.28)	PRTRvKRVAEKPPLELprkSVGDT
  228-  247 (37.96/22.35)	PFTR.RGLTGKSYGEL...SVPDT
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP17926 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ASRSSPVNSSLHNQLNQNSTTPASMDAHTPRTRVKRVAEKPPLELPRKSVGDTESFRSPFTRR
2) EESMHHHSLSSTSPVARSPKFSQVSMQLNDHPSSRSEVSSRSPSSLA
3) SLDQGGFSPELSTFSNESDQMPSAADDVEAEMRR
170
729
300
232
775
333










Molecular Recognition Features






MoRF SequenceStartStop




1) IDRIFPAFYDN
259
269