Description | Uncharacterized protein |
Sequence | MTSSSSNKETTEEEQTAPEISPAEGGGGASSGGVGKADPVSSGGEEESGGAGEKVDDPMEEDSVSPATVFCIRLKQPRSNLQHKMSVPELCRQFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHVVIPERPTECAVFNVIADSPRDSVQFIEWSPTSYSRALLIANFHGRTTIWTQPSQGPSNLVRDASCWQREHEWRQDIAVVTKWLSSVSPYRWLSSKSSTPTSSKSAFEEKFLSQHSQTSARWPNFLCVCSVFSSGSVQLHWSPSQNNTSPKWFCTSKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQATPMASVGNGVPPSVKPPNWSGFAPLAAYLFNWQEHLMSEVKQGKKQTDEDFTDTITLHCSPVSNFSAYVSPEAAAQSAATTTWGSGVSAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPLITGWRVQRWESSVQPVVLHPIFGNPTSGFGGQAPMQTVWVSKVDTSIPPTNDFKNYQPAAAGPISDVRKTSDSGAEKTKRVIFDPSDLPSDVRTLARIVYSAHGGEIAVAFLGGGVHIFSGTNFTLVDNHQINVGSTIAAPAFSSTSCCSASVWHDTSKDHTVLKIIRVLPPAVPSSQVKANSAIWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPTSQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGRGIESALINPSALVSEPWQASGETLSGIDPEAMTVEPNLVPSIQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVTSPTQSSASPAPSQGGQSGSTSSTGSTQMQAWVQGAIAKISSTTDGVTGSTPNPISGPSSVMPISINTGTFPGTPAVRLIGDCHFLRRLCQLLLFCFFFRRTQLPRFAGSAQRNSTDTNVQKPQSGAPGKVEEINTVTSKPAPAMVRSDEGQTARGGQVMPGAKPVEDGPAGRHRVGSGNAGQGYSFEEVKVLFRILMDLCRRTATLAHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNMFGGPWSDAEDMGSDDTLKLNSDPLDFSSLENCDVYYSAHGLWPRKRRLSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAMWKTGLEGVWYKCIRCLRQTSAFASTGAAANPPNQNEREAWWISRWAYGCPMCGGTWVRVV |
Length | 1248 |
Position | Tail |
Organism | Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Malpighiales> Salicaceae> Saliceae> Populus. |
Aromaticity | 0.08 |
Grand average of hydropathy | -0.225 |
Instability index | 44.91 |
Isoelectric point | 6.11 |
Molecular weight | 134141.31 |
Publications | PubMed=16973872 |
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | |
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IBA:GO_Central |
Binary Interactions |
Repeats | >MDP17905 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 125.00| 29| 110| 399| 437| 1 --------------------------------------------------------------------------- 399- 427 (49.06/21.12) PVSNFSAYVSPEAAAQ.SAATTTWGSGVSA 508- 536 (41.92/16.02) PTNDFKNY.QPAAAGPiSDVRKTSDSGAEK 550- 575 (34.02/29.92) DVRTL.ARIVYSAHGG.EIAVAFLGGGV.. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 299.92| 92| 111| 822| 919| 3 --------------------------------------------------------------------------- 822- 919 (148.80/78.07) GS.NRNMVTSPTQSSASPAPSQGGQSGSTSSTGSTQMQAWVQGAIAKissTTDGVTGSTPNPiSGPSSVMPI.SINTGTFPGTPAVRLIgdCHFLRRLCQ 937- 1030 (151.12/66.90) GSaQRNSTDTNVQKPQSGAPGKVEEINTVTSKPAPAMVRSDEGQTAR...GGQVMPGAKPVE.DGPAGRHRVgSGNAGQGYSFEEVKVL..FRILMDLCR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 351.24| 111| 151| 63| 213| 4 --------------------------------------------------------------------------- 63- 189 (176.98/164.35) SVSPATVFCIRLKQPRSNlqhKMSVPE.LCRQFSAVA..WCGKLNAIACASETCARI...PSSNANPPFWI.PIHVVIPERPTE.CAVFNVIADSprdSVQFIEWSPtsysrallIANfHGRTTIWtQPSQGPSN 216- 334 (174.26/121.96) SVSPYRWLSSKSSTPTSS...KSAFEEkFLSQHSQTSarWPNFLCVCSVFSSGSVQLhwsPSQNNTSPKWFcTSKGLLGAGPSGiMAADAIITDS...GAMHVAGVP........IVN.PSTVVVW.EVTPGPGN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 56.40| 16| 18| 22| 39| 6 --------------------------------------------------------------------------- 24- 39 (30.79/14.81) EGGGGASSGGVGKA..DP 41- 58 (25.62/ 6.21) SSGGEEESGGAGEKvdDP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 151.24| 46| 573| 613| 669| 7 --------------------------------------------------------------------------- 613- 669 (66.24/69.05) WHdTSKDHTVLKIIRVL..PPAVPSSQVKANSAiwERaiAERF.WWsllvgVDWWdAVGC 1189- 1237 (85.00/50.71) WK.TGLEGVWYKCIRCLrqTSAFASTGAAANPP..NQ..NEREaWW.....ISRW.AYGC --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 83.71| 18| 151| 335| 352| 8 --------------------------------------------------------------------------- 335- 352 (34.55/18.03) GF..QATPMASVG.NGVPPSV 462- 476 (26.77/12.29) GW..RVQRWES....SVQPVV 487- 506 (22.39/ 9.06) GFggQA.PMQTVWvSKVDTSI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 37.41| 10| 18| 749| 758| 9 --------------------------------------------------------------------------- 749- 758 (18.21/ 9.39) INPSALVSEP 769- 778 (19.20/10.29) IDPEAMTVEP --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) GVGKADPV 2) NKETTEEEQTAPEISPAEG | 33 7 | 40 25 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab